Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes BRD3
  • Mouse genes Brd3
  • Rat genes Brd3
  • Zfish genes brd3a,brd3b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Brd3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003682	chromatin binding	BRD3	IDA		Human	PMID:18406326
Molecular Function	GO:0070577	lysine-acetylated histone binding	BRD3	IDA		Human	PMID:22464331
Molecular Function	GO:0070577	lysine-acetylated histone binding	BRD3	IDA		Human	PMID:27105114
Molecular Function	GO:0005515	protein binding	BRD3	IPI	UniProtKB:P01106	Human	PMID:20195357
Cellular Component	GO:0005634	nucleus	BRD3	IDA		Human	PMID:25593309
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	BRD3	IDA		Human	PMID:18406326
Biological Process	GO:0002574	thrombocyte differentiation	brd3a	IMP	ZFIN:ZDB-MRPHLNO-141013-5	Zfish	PMID:25010335

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern