Comparative GO Graph (mouse, human, rat, zebrafish)

Source

Alliance of Genome Resources

Compare experimental GO annotations for Human-Mouse-Rat-Zebrafish orthologs to Mouse Bsn

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

This class contains
- Human genes BSN
- Mouse genes Bsn
- Rat genes Bsn
- Zfish genes bsna,bsnb
Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Bsn

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0045503	dynein light chain binding	Bsn	IPI	RGD:619866\|RGD:619860	Rat	PMID:19380881\|RGD:12793047
Molecular Function	GO:0045503	dynein light chain binding	Bsn	IPI	UniProtKB:P63170	Rat	PMID:19380881\|RGD:12793047
Molecular Function	GO:0045503	dynein light chain binding	Bsn	IPI	UniProtKB:Q78P75	Rat	PMID:19380881\|RGD:12793047
Molecular Function	GO:0005515	protein binding	BSN	IPI	UniProtKB:Q93009	Human	PMID:35044719
Molecular Function	GO:0005515	protein binding	Bsn	IPI	UniProtKB:A8WCF8	Mouse	MGI:MGI:3762080\|PMID:17869247
Molecular Function	GO:0005515	protein binding	Bsn	IPI	PR:Q9QYX7	Mouse	PMID:19812333
Molecular Function	GO:0005515	protein binding	Bsn	IPI	PR:Q7TN73	Mouse	PMID:19812333
Molecular Function	GO:0005515	protein binding	Bsn	IPI	RGD:708372	Rat	PMID:12163476\|RGD:1299401
Molecular Function	GO:0005515	protein binding	Bsn	IPI	UniProtKB:Q920M9	Rat	PMID:23403927\|RGD:8554101
Molecular Function	GO:0098882	structural constituent of presynaptic active zone	Bsn	IMP		Mouse	PMID:21092861
Molecular Function	GO:0098882	structural constituent of presynaptic active zone	Bsn	IDA		Mouse	PMID:21092861
Molecular Function	GO:0098882	structural constituent of presynaptic active zone	Bsn	IDA		Mouse	PMID:26793095
Molecular Function	GO:0098882	structural constituent of presynaptic active zone	Bsn	IMP		Mouse	PMID:26793095
Molecular Function	GO:0098882	structural constituent of presynaptic active zone	Bsn	IPI		Mouse	PMID:26793095
Molecular Function	GO:0001222	transcription corepressor binding	Bsn	IPI	UniProtKB:Q9Z2F5	Rat	PMID:25652077\|RGD:11079187
Cellular Component	GO:0030424	axon	Bsn	IDA		Mouse	PMID:23791195
Cellular Component	GO:1904115	axon cytoplasm	Bsn	IDA		Rat	PMID:19380881\|RGD:12793047
Cellular Component	GO:0005938	cell cortex	Bsn	IDA		Rat	PMID:19380881\|RGD:12793047
Cellular Component	GO:0009986	cell surface	Bsn	IDA		Mouse	MGI:MGI:5294265\|PMID:21940441
Cellular Component	GO:0098683	cochlear hair cell ribbon synapse	Bsn	IDA		Mouse	PMID:21092861
Cellular Component	GO:0098683	cochlear hair cell ribbon synapse	Bsn	IMP		Mouse	PMID:21092861
Cellular Component	GO:0048788	cytoskeleton of presynaptic active zone	Bsn	IDA		Rat	PMID:11596050\|RGD:9850129
Cellular Component	GO:0048788	cytoskeleton of presynaptic active zone	Bsn	IDA		Rat	PMID:9679147\|RGD:69780
Cellular Component	GO:0030425	dendrite	Bsn	IDA		Mouse	MGI:MGI:5294265\|PMID:21940441
Cellular Component	GO:0060076	excitatory synapse	Bsn	IDA		Rat	PMID:19730411\|RGD:8554379
Cellular Component	GO:0098982	GABA-ergic synapse	Bsn	IDA		Mouse	PMID:26793095
Cellular Component	GO:0098982	GABA-ergic synapse	Bsn	IMP		Mouse	PMID:26793095
Cellular Component	GO:0098982	GABA-ergic synapse	Bsn	IPI		Mouse	PMID:26793095
Cellular Component	GO:0098982	GABA-ergic synapse	Bsn	IDA		Rat	PMID:10340516\|RGD:13702152
Cellular Component	GO:0098978	glutamatergic synapse	Bsn	IMP		Mouse	PMID:21092860
Cellular Component	GO:0098978	glutamatergic synapse	Bsn	IDA		Mouse	PMID:21092860
Cellular Component	GO:0098978	glutamatergic synapse	Bsn	IMP		Mouse	PMID:26793095
Cellular Component	GO:0098978	glutamatergic synapse	Bsn	IDA		Mouse	PMID:26793095
Cellular Component	GO:0098978	glutamatergic synapse	Bsn	IPI		Mouse	PMID:26793095
Cellular Component	GO:0098978	glutamatergic synapse	Bsn	IDA		Rat	PMID:10340516\|RGD:13702152
Cellular Component	GO:0098978	glutamatergic synapse	Bsn	IDA		Rat	PMID:9679147\|RGD:69780
Cellular Component	GO:0005798	Golgi-associated vesicle	Bsn	IDA		Rat	PMID:22875941\|RGD:14390063
Cellular Component	GO:0098686	hippocampal mossy fiber to CA3 synapse	Bsn	IDA		Rat	PMID:10340516\|RGD:13702152
Cellular Component	GO:0098686	hippocampal mossy fiber to CA3 synapse	Bsn	IDA		Rat	PMID:9679147\|RGD:69780
Cellular Component	GO:0060077	inhibitory synapse	Bsn	IDA		Rat	PMID:11596050\|RGD:9850129
Cellular Component	GO:0044306	neuron projection terminus	Bsn	IDA		Mouse	PMID:12115694
Cellular Component	GO:0043025	neuronal cell body	Bsn	IDA		Rat	PMID:16373352\|RGD:9850093
Cellular Component	GO:1990257	piccolo-bassoon transport vesicle	Bsn	IDA		Rat	PMID:19380881\|RGD:12793047
Cellular Component	GO:0014069	postsynaptic density	Bsn	IDA		Mouse	PMID:17114649
Cellular Component	GO:0098793	presynapse	Bsn	IDA		Mouse	PMID:31787876
Cellular Component	GO:0098793	presynapse	Bsn	IDA		Mouse	PMID:24554721
Cellular Component	GO:0048786	presynaptic active zone	Bsn	IDA		Mouse	PMID:23791195
Cellular Component	GO:0048786	presynaptic active zone	Bsn	IDA		Mouse	PMID:25709106
Cellular Component	GO:0048786	presynaptic active zone	Bsn	IDA		Mouse	PMID:15935055
Cellular Component	GO:0048786	presynaptic active zone	Bsn	IDA		Mouse	PMID:21356198
Cellular Component	GO:0048786	presynaptic active zone	Bsn	IDA		Rat	PMID:15978582\|RGD:8661623
Cellular Component	GO:0048786	presynaptic active zone	Bsn	IDA		Rat	PMID:22875941\|RGD:14390063
Cellular Component	GO:0098831	presynaptic active zone cytoplasmic component	Bsn	IDA		Mouse	MGI:MGI:5816444\|PMID:21144999
Cellular Component	GO:0098831	presynaptic active zone cytoplasmic component	Bsn	IDA		Rat	PMID:10340516\|RGD:13702152
Cellular Component	GO:0098831	presynaptic active zone cytoplasmic component	Bsn	IDA		Rat	PMID:9679147\|RGD:69780
Cellular Component	GO:0097470	ribbon synapse	Bsn	IDA		Rat	PMID:11596050\|RGD:9850129
Cellular Component	GO:0098685	Schaffer collateral - CA1 synapse	Bsn	IMP		Mouse	PMID:26793095
Cellular Component	GO:0098685	Schaffer collateral - CA1 synapse	Bsn	IDA		Mouse	PMID:26793095
Cellular Component	GO:0098685	Schaffer collateral - CA1 synapse	Bsn	IPI		Mouse	PMID:26793095
Cellular Component	GO:0045202	synapse	Bsn	IDA		Mouse	PMID:10900017
Cellular Component	GO:0045202	synapse	Bsn	IDA		Mouse	PMID:12115694
Cellular Component	GO:0045202	synapse	Bsn	IDA		Mouse	PMID:14622577
Cellular Component	GO:0045202	synapse	Bsn	IDA		Mouse	PMID:19966281
Cellular Component	GO:0045202	synapse	Bsn	IDA		Rat	PMID:16373352\|RGD:9850093
Cellular Component	GO:0097060	synaptic membrane	Bsn	IDA		Rat	PMID:19380881\|RGD:12793047
Cellular Component	GO:0008021	synaptic vesicle	Bsn	IDA		Rat	PMID:26212709\|RGD:13792549
Cellular Component	GO:0005802	trans-Golgi network	Bsn	IDA		Rat	PMID:16373352\|RGD:9850093
Biological Process	GO:0008088	axo-dendritic transport	Bsn	IDA		Rat	PMID:19380881\|RGD:12793047
Biological Process	GO:0048790	maintenance of presynaptic active zone structure	Bsn	IDA		Mouse	MGI:MGI:6189424\|PMID:26793095
Biological Process	GO:0099526	presynapse to nucleus signaling pathway	Bsn	IMP		Mouse	MGI:MGI:5635967\|PMID:25652077
Biological Process	GO:1904071	presynaptic active zone assembly	Bsn	IDA		Rat	PMID:22875941\|RGD:14390063
Biological Process	GO:0035418	protein localization to synapse	Bsn	IGI	UniProtKB:Q9QYX7	Mouse	MGI:MGI:5635967\|PMID:25652077
Biological Process	GO:0098693	regulation of synaptic vesicle cycle	Bsn	IMP		Mouse	PMID:21092860
Biological Process	GO:0098693	regulation of synaptic vesicle cycle	Bsn	IDA		Mouse	PMID:21092860
Biological Process	GO:1904666	regulation of ubiquitin protein ligase activity	Bsn	IDA		Rat	PMID:23403927\|RGD:8554101
Biological Process	GO:0008090	retrograde axonal transport	Bsn	IDA		Rat	PMID:19380881\|RGD:12793047
Biological Process	GO:0050808	synapse organization	Bsn	IDA		Rat	PMID:23403927\|RGD:8554101
Biological Process	GO:0097091	synaptic vesicle clustering	Bsn	IDA		Mouse	PMID:20332206
Biological Process	GO:0097091	synaptic vesicle clustering	Bsn	IMP		Mouse	PMID:20332206

Gene Ontology Evidence Code Abbreviations:

EXP Inferred from experiment

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

HTP Inferred from High Throughput Experiment

HDA Inferred from High Throughput Direct Assay

HMP Inferred from High Throughput Mutant Phenotype

HGI Inferred from High Throughput Genetic Interaction

HEP Inferred from High Throughput Expression Pattern

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 10/15/2024 MGI 6.24

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023. Complete table of the annotations represented in this image is provided below.

Molecular Function

Cellular Component

Biological Process

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.