Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes BSX
  • Mouse genes Bsx
  • Rat genes Bsx
  • Zfish genes bsx
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Bsx

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	Bsx	IDA		Mouse	MGI:MGI:3713592|PMID:17353277
Molecular Function	GO:0005515	protein binding	Bsx	IPI	PR:Q01147	Mouse	PMID:17550780
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Bsx	IDA		Mouse	MGI:MGI:3713592|PMID:17353277
Molecular Function	GO:0043565	sequence-specific DNA binding	Bsx	IDA		Mouse	PMID:17550780
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	BSX	IDA		Human	PMID:28473536
Cellular Component	GO:0005634	nucleus	Bsx	IDA		Mouse	PMID:17550780
Cellular Component	GO:0005667	transcription regulator complex	Bsx	IDA		Mouse	PMID:17550780
Biological Process	GO:0042755	eating behavior	Bsx	IMP	MGI:MGI:3716209	Mouse	PMID:17550780
Biological Process	GO:0007626	locomotory behavior	Bsx	IMP	MGI:MGI:3716209	Mouse	PMID:17550780
Biological Process	GO:0060056	mammary gland involution	Bsx	IMP	MGI:MGI:3719242	Mouse	PMID:17485440
Biological Process	GO:0060056	mammary gland involution	Bsx	IMP	MGI:MGI:3719245	Mouse	PMID:17485440
Biological Process	GO:0021982	pineal gland development	bsx	IMP	ZFIN:ZDB-MRPHLNO-200408-2	Zfish	PMID:31602413
Biological Process	GO:0021982	pineal gland development	bsx	IMP	ZFIN:ZDB-GENO-180801-7	Zfish	PMID:29945867
Biological Process	GO:0021982	pineal gland development	bsx	IMP	ZFIN:ZDB-GENO-200806-9	Zfish	PMID:31602413
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Bsx	IDA		Mouse	PMID:17550780
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Bsx	IGI	MGI:MGI:1890077	Mouse	PMID:17550780

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern