Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes C1GALT1
  • Mouse genes C1galt1
  • Rat genes C1galt1
  • Zfish genes c1galt1a,c1galt1la,c1galt1lb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set C1galt1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0016263	glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity	C1GALT1	IDA		Human	PMID:11677243
Molecular Function	GO:0005515	protein binding	C1GALT1	IPI	UniProtKB:Q96EU7	Human	PMID:21496458
Cellular Component	GO:0016020	membrane	C1GALT1	IDA		Human	PMID:11677243
Biological Process	GO:0001525	angiogenesis	C1GALT1	IMP		Human	PMID:17228361
Biological Process	GO:0001525	angiogenesis	C1galt1	IMP	MGI:MGI:3531503	Mouse	PMID:14745002
Biological Process	GO:0060576	intestinal epithelial cell development	C1galt1	IMP	MGI:MGI:3714051	Mouse	PMID:21383503
Biological Process	GO:0001822	kidney development	C1GALT1	IMP		Human	PMID:17228361
Biological Process	GO:0006493	protein O-linked glycosylation	C1galt1	IMP	MGI:MGI:3714051	Mouse	PMID:21383503

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern