Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes C1QL3
  • Mouse genes C1ql3
  • Rat genes C1ql3
  • Zfish genes c1ql3a,c1ql3b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set C1ql3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	C1ql3	IPI	UniProtKB:Q9ESN4	Mouse	MGI:MGI:5927365|PMID:25752542
Molecular Function	GO:0005515	protein binding	C1ql3	IPI	PR:P19324	Mouse	PMID:10862616
Molecular Function	GO:0005515	protein binding	C1ql3	IPI	UniProtKB:G3XA05	Mouse	PMID:21262840
Cellular Component	GO:0005576	extracellular region	C1ql3	IDA		Mouse	PMID:21262840
Cellular Component	GO:0098978	glutamatergic synapse	C1ql3	IMP		Mouse	PMID:27133466
Cellular Component	GO:0098978	glutamatergic synapse	C1ql3	IDA		Mouse	PMID:27133466
Cellular Component	GO:0098686	hippocampal mossy fiber to CA3 synapse	C1ql3	IDA		Mouse	PMID:27133466
Cellular Component	GO:0098686	hippocampal mossy fiber to CA3 synapse	C1ql3	IMP		Mouse	PMID:27133466
Cellular Component	GO:0043083	synaptic cleft	C1ql3	IDA		Mouse	PMID:27133466
Biological Process	GO:0099645	neurotransmitter receptor localization to postsynaptic specialization membrane	C1ql3	IMP		Mouse	PMID:27133466
Biological Process	GO:0099645	neurotransmitter receptor localization to postsynaptic specialization membrane	C1ql3	IDA		Mouse	PMID:27133466
Biological Process	GO:0097107	postsynaptic density assembly	C1ql3	IMP		Mouse	PMID:27133466
Biological Process	GO:0097107	postsynaptic density assembly	C1ql3	IDA		Mouse	PMID:27133466
Biological Process	GO:0050807	regulation of synapse organization	C1ql3	IDA		Mouse	PMID:21262840

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern