Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes C9
  • Mouse genes C9
  • Rat genes C9
  • Zfish genes c9
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set C9

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	C9	IPI	UniProtKB:P00441	Human	PMID:32814053
Cellular Component	GO:0072562	blood microparticle	C9	HDA		Human	PMID:22516433
Cellular Component	GO:0070062	extracellular exosome	C9	HDA		Human	PMID:19056867
Cellular Component	GO:0070062	extracellular exosome	C9	HDA		Human	PMID:23533145
Cellular Component	GO:0005615	extracellular space	C9	IDA		Human	PMID:22832194
Cellular Component	GO:0005615	extracellular space	C9	IDA		Human	PMID:26841934
Cellular Component	GO:0005579	membrane attack complex	C9	IPI		Human	PMID:30552328
Cellular Component	GO:0005579	membrane attack complex	C9	IDA		Human	PMID:22832194
Cellular Component	GO:0005579	membrane attack complex	C9	IDA		Human	PMID:26841934
Cellular Component	GO:0005886	plasma membrane	C9	IDA		Human	PMID:26841934
Biological Process	GO:0007596	blood coagulation	C9	IMP		Rat	PMID:15956288|RGD:1625334
Biological Process	GO:0001906	cell killing	C9	IDA		Human	PMID:26841934
Biological Process	GO:0001906	cell killing	C9	IDA		Human	PMID:30111885
Biological Process	GO:0071391	cellular response to estrogen stimulus	c9	IDA		Zfish	PMID:18618001
Biological Process	GO:0042742	defense response to bacterium	c9	IDA		Zfish	PMID:29572872
Biological Process	GO:0006955	immune response	c9	IDA		Zfish	PMID:29572872
Biological Process	GO:0051260	protein homooligomerization	C9	IDA		Human	PMID:26841934
Biological Process	GO:0051260	protein homooligomerization	C9	IDA		Human	PMID:30111885

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern