Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CACNA1F
  • Mouse genes Cacna1f
  • Rat genes Cacna1f
  • Zfish genes cacna1fa,cacna1fb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cacna1f

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005245	voltage-gated calcium channel activity	CACNA1F	IDA		Human	PMID:15897456
Molecular Function	GO:0005245	voltage-gated calcium channel activity	CACNA1F	IDA		Human	PMID:27226626
Molecular Function	GO:0005245	voltage-gated calcium channel activity	Cacna1f	IMP	MGI:MGI:3609549	Mouse	PMID:16155113
Cellular Component	GO:0016020	membrane	CACNA1F	IDA		Human	PMID:15897456
Cellular Component	GO:0043025	neuronal cell body	Cacna1f	IDA		Rat	PMID:11526344|RGD:632484
Cellular Component	GO:0043204	perikaryon	Cacna1f	IDA		Rat	PMID:16736476|RGD:1582593
Cellular Component	GO:0001750	photoreceptor outer segment	Cacna1f	IDA		Rat	PMID:11526344|RGD:632484
Cellular Component	GO:0005891	voltage-gated calcium channel complex	CACNA1F	IDA		Human	PMID:15897456
Biological Process	GO:0007409	axonogenesis	Cacna1f	IMP	MGI:MGI:3609549	Mouse	PMID:16155113
Biological Process	GO:0048813	dendrite morphogenesis	Cacna1f	IMP	MGI:MGI:3609549	Mouse	PMID:16155113
Biological Process	GO:0050908	detection of light stimulus involved in visual perception	CACNA1F	IMP		Human	PMID:7571473
Biological Process	GO:0006874	intracellular calcium ion homeostasis	Cacna1f	IMP	MGI:MGI:3609549	Mouse	PMID:16155113
Biological Process	GO:0060041	retina development in camera-type eye	Cacna1f	IMP	MGI:MGI:3605845	Mouse	PMID:21052544
Biological Process	GO:0050808	synapse organization	cacna1fa	IMP	ZFIN:ZDB-GENO-140514-11	Zfish	PMID:24419318
Biological Process	GO:0007601	visual perception	CACNA1F	IMP		Human	PMID:16505158
Biological Process	GO:0007601	visual perception	CACNA1F	IMP		Human	PMID:9662399
Biological Process	GO:0007601	visual perception	CACNA1F	IMP		Human	PMID:9662400
Biological Process	GO:0007601	visual perception	Cacna1f	IMP	MGI:MGI:3609549	Mouse	PMID:16155113
Biological Process	GO:0007601	visual perception	Cacna1f	IEP		Rat	PMID:11526344|RGD:632484

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern