Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CALB1
  • Mouse genes Calb1
  • Rat genes Calb1
  • Zfish genes calb1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Calb1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005509	calcium ion binding	CALB1	IMP		Human	PMID:18359862
Molecular Function	GO:0005509	calcium ion binding	CALB1	IDA		Human	PMID:30289411
Molecular Function	GO:0005509	calcium ion binding	Calb1	IDA		Mouse	MGI:MGI:5819346|PMID:19658395
Molecular Function	GO:0005509	calcium ion binding	Calb1	IDA		Rat	PMID:19658395|RGD:7205450
Molecular Function	GO:0099567	calcium ion binding involved in regulation of postsynaptic cytosolic calcium ion concentration	Calb1	IMP		Mouse	PMID:9037080
Molecular Function	GO:0099567	calcium ion binding involved in regulation of postsynaptic cytosolic calcium ion concentration	Calb1	IDA		Mouse	PMID:9037080
Molecular Function	GO:0099534	calcium ion binding involved in regulation of presynaptic cytosolic calcium ion concentration	Calb1	IDA		Mouse	PMID:12691666
Molecular Function	GO:0099534	calcium ion binding involved in regulation of presynaptic cytosolic calcium ion concentration	Calb1	IMP		Mouse	PMID:12691666
Molecular Function	GO:0005515	protein binding	CALB1	IPI	UniProtKB:Q9NQA5	Human	PMID:16763551
Molecular Function	GO:0005515	protein binding	CALB1	IPI	UniProtKB:Q9Y6K9	Human	PMID:20098747
Molecular Function	GO:0005515	protein binding	CALB1	IPI	UniProtKB:Q96IK1-2	Human	PMID:32814053
Molecular Function	GO:0008270	zinc ion binding	CALB1	IMP		Human	PMID:18359862
Cellular Component	GO:0030424	axon	CALB1	IDA		Human	PMID:22796338
Cellular Component	GO:0030424	axon	Calb1	IDA		Mouse	MGI:MGI:5426783|PMID:11724816
Cellular Component	GO:0030424	axon	Calb1	IDA		Mouse	PMID:26671463
Cellular Component	GO:0030424	axon	Calb1	IDA		Mouse	PMID:12115678
Cellular Component	GO:0030424	axon	Calb1	IDA		Rat	PMID:11724816|RGD:8553674
Cellular Component	GO:0044305	calyx of Held	Calb1	IDA		Rat	PMID:15355314|RGD:13702370
Cellular Component	GO:0032437	cuticular plate	Calb1	IDA		Rat	PMID:16120789|RGD:7175527
Cellular Component	GO:0005737	cytoplasm	Calb1	IDA		Mouse	PMID:10973246
Cellular Component	GO:0005737	cytoplasm	Calb1	IDA		Mouse	PMID:12205031
Cellular Component	GO:0005737	cytoplasm	Calb1	IDA		Mouse	PMID:19936227
Cellular Component	GO:0005737	cytoplasm	Calb1	IDA		Mouse	PMID:12716955
Cellular Component	GO:0005737	cytoplasm	Calb1	IDA		Mouse	PMID:20531390
Cellular Component	GO:0005737	cytoplasm	Calb1	IDA		Mouse	PMID:15479642
Cellular Component	GO:0005737	cytoplasm	Calb1	IDA		Mouse	PMID:12115678
Cellular Component	GO:0005737	cytoplasm	Calb1	IDA		Mouse	PMID:10828532
Cellular Component	GO:0005737	cytoplasm	Calb1	IDA		Rat	PMID:16120789|RGD:7175527
Cellular Component	GO:0005829	cytosol	Calb1	IDA		Mouse	PMID:15579147
Cellular Component	GO:0030425	dendrite	CALB1	IDA		Human	PMID:22796338
Cellular Component	GO:0030425	dendrite	Calb1	IDA		Mouse	PMID:10973246
Cellular Component	GO:0043197	dendritic spine	Calb1	IDA		Rat	PMID:8834400|RGD:12050144
Cellular Component	GO:0070062	extracellular exosome	CALB1	HDA		Human	PMID:19056867
Cellular Component	GO:0098982	GABA-ergic synapse	Calb1	IDA		Mouse	PMID:12691666
Cellular Component	GO:0098982	GABA-ergic synapse	Calb1	IMP		Mouse	PMID:12691666
Cellular Component	GO:0098978	glutamatergic synapse	Calb1	IMP		Mouse	PMID:9037080
Cellular Component	GO:0098978	glutamatergic synapse	Calb1	IDA		Mouse	PMID:9037080
Cellular Component	GO:0098978	glutamatergic synapse	Calb1	IMP		Mouse	PMID:12691666
Cellular Component	GO:0098978	glutamatergic synapse	Calb1	IDA		Mouse	PMID:12691666
Cellular Component	GO:0098686	hippocampal mossy fiber to CA3 synapse	Calb1	IDA		Mouse	PMID:12691666
Cellular Component	GO:0098686	hippocampal mossy fiber to CA3 synapse	Calb1	IMP		Mouse	PMID:12691666
Cellular Component	GO:0005622	intracellular anatomical structure	Calb1	IDA		Mouse	PMID:20040500
Cellular Component	GO:0043005	neuron projection	Calb1	IDA		Mouse	PMID:12115694
Cellular Component	GO:0043005	neuron projection	Calb1	IDA		Mouse	PMID:10989258
Cellular Component	GO:0043005	neuron projection	Calb1	IDA		Mouse	PMID:24466353
Cellular Component	GO:0043025	neuronal cell body	CALB1	IDA		Human	PMID:22796338
Cellular Component	GO:0043025	neuronal cell body	Calb1	IDA		Mouse	PMID:24466353
Cellular Component	GO:0043025	neuronal cell body	Calb1	IDA		Mouse	PMID:10989258
Cellular Component	GO:0043025	neuronal cell body	Calb1	IDA		Mouse	PMID:12115694
Cellular Component	GO:0043025	neuronal cell body	Calb1	IDA		Mouse	PMID:10973246
Cellular Component	GO:0005634	nucleus	CALB1	IDA		Human	PMID:16928804
Cellular Component	GO:0005634	nucleus	Calb1	IDA		Mouse	MGI:MGI:1353814|PMID:10741426
Cellular Component	GO:0005634	nucleus	Calb1	IDA		Mouse	PMID:10828532
Cellular Component	GO:0005634	nucleus	Calb1	IDA		Rat	PMID:16120789|RGD:7175527
Cellular Component	GO:0098794	postsynapse	Calb1	IDA		Rat	PMID:15809430|RGD:13702287
Cellular Component	GO:0098794	postsynapse	Calb1	IMP		Rat	PMID:15809430|RGD:13702287
Cellular Component	GO:0099524	postsynaptic cytosol	Calb1	IDA		Rat	PMID:15355314|RGD:13702370
Cellular Component	GO:0099523	presynaptic cytosol	Calb1	IDA		Rat	PMID:12528187|RGD:727642
Cellular Component	GO:0032420	stereocilium	Calb1	IDA		Rat	PMID:16120789|RGD:7175527
Cellular Component	GO:0045202	synapse	Calb1	IDA		Mouse	PMID:16814779
Cellular Component	GO:0043195	terminal bouton	Calb1	HDA		Rat	PMID:24876496|RGD:10047219
Biological Process	GO:0071310	cellular response to organic substance	Calb1	IDA		Mouse	PMID:18497889
Biological Process	GO:0090102	cochlea development	Calb1	IEP		Rat	PMID:16120789|RGD:7175527
Biological Process	GO:0007611	learning or memory	Calb1	IEP		Rat	PMID:15318329|RGD:1358474
Biological Process	GO:0007626	locomotory behavior	Calb1	IMP	MGI:MGI:2181196	Mouse	PMID:12716955
Biological Process	GO:0007616	long-term memory	CALB1	IMP		Human	PMID:22796338
Biological Process	GO:0072205	metanephric collecting duct development	Calb1	IEP		Mouse	MGI:MGI:3806730|PMID:18618131
Biological Process	GO:0072286	metanephric connecting tubule development	Calb1	IEP		Mouse	MGI:MGI:3806730|PMID:18618131
Biological Process	GO:0072221	metanephric distal convoluted tubule development	Calb1	IEP		Mouse	MGI:MGI:3806730|PMID:18618131
Biological Process	GO:0035502	metanephric part of ureteric bud development	Calb1	IEP		Mouse	MGI:MGI:3806730|PMID:18618131
Biological Process	GO:1900271	regulation of long-term synaptic potentiation	Calb1	IMP		Mouse	MGI:MGI:3775957|PMID:11955516
Biological Process	GO:0099509	regulation of presynaptic cytosolic calcium ion concentration	Calb1	IDA		Mouse	MGI:MGI:6189686|PMID:12691666
Biological Process	GO:0099509	regulation of presynaptic cytosolic calcium ion concentration	Calb1	IMP		Rat	PMID:19658395|RGD:7205450
Biological Process	GO:0048167	regulation of synaptic plasticity	Calb1	IMP		Rat	PMID:15318329|RGD:1358474
Biological Process	GO:0060041	retina development in camera-type eye	Calb1	IEP		Mouse	MGI:MGI:1353814|PMID:10741426
Biological Process	GO:0010842	retina layer formation	Calb1	IEP		Mouse	MGI:MGI:1353814|PMID:10741426
Biological Process	GO:0007614	short-term memory	CALB1	IMP		Human	PMID:22796338

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern