Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CALCOCO1
  • Mouse genes Calcoco1
  • Rat genes Calcoco1
  • Zfish genes calcoco1a,calcoco1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Calcoco1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008013	beta-catenin binding	CALCOCO1	IPI	UniProtKB:O42486	Human	PMID:16344550
Molecular Function	GO:0003682	chromatin binding	Calcoco1	IDA		Mouse	PMID:15383530
Molecular Function	GO:0030374	nuclear receptor coactivator activity	CALCOCO1	IDA		Human	PMID:16344550
Molecular Function	GO:0005515	protein binding	CALCOCO1	IPI	UniProtKB:O14777	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	CALCOCO1	IPI	UniProtKB:O42486	Human	PMID:16344550
Molecular Function	GO:0005515	protein binding	CALCOCO1	IPI	UniProtKB:Q9Y3R0	Human	PMID:16344550
Molecular Function	GO:0005515	protein binding	CALCOCO1	IPI	UniProtKB:O14777	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CALCOCO1	IPI	UniProtKB:P60520	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CALCOCO1	IPI	UniProtKB:Q2TBE0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CALCOCO1	IPI	UniProtKB:Q3B820	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CALCOCO1	IPI	UniProtKB:Q8TC07	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CALCOCO1	IPI	UniProtKB:Q96CN7	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CALCOCO1	IPI	UniProtKB:Q96LK0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CALCOCO1	IPI	UniProtKB:Q9UII6	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CALCOCO1	IPI	UniProtKB:O76064	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CALCOCO1	IPI	UniProtKB:P54646	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CALCOCO1	IPI	UniProtKB:Q13515	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CALCOCO1	IPI	UniProtKB:Q2TBE0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CALCOCO1	IPI	UniProtKB:Q96LK0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CALCOCO1	IPI	UniProtKB:Q96NC0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CALCOCO1	IPI	UniProtKB:Q9H0I2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CALCOCO1	IPI	UniProtKB:Q9H0R8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CALCOCO1	IPI	UniProtKB:Q9UII6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Calcoco1	IPI	UniProtKB:P17679|UniProtKB:Q8CH18	Mouse	MGI:MGI:5606145|PMID:24245781
Molecular Function	GO:0005515	protein binding	Calcoco1	IPI	UniProtKB:O42486	Mouse	MGI:MGI:3694288|PMID:16344550
Molecular Function	GO:0005515	protein binding	Calcoco1	IPI	UniProtKB:Q7TPU7	Mouse	MGI:MGI:3530629|PMID:14690606
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	CALCOCO1	IDA		Human	PMID:24245781
Molecular Function	GO:0043565	sequence-specific DNA binding	CALCOCO1	IDA		Human	PMID:16344550
Molecular Function	GO:0000976	transcription cis-regulatory region binding	CALCOCO1	IDA		Human	PMID:16344550
Molecular Function	GO:0003713	transcription coactivator activity	CALCOCO1	IMP		Human	PMID:16344550
Molecular Function	GO:0003713	transcription coactivator activity	CALCOCO1	IMP		Human	PMID:24245781
Molecular Function	GO:0003713	transcription coactivator activity	Calcoco1	IMP		Mouse	MGI:MGI:5606145|PMID:24245781
Molecular Function	GO:0003713	transcription coactivator activity	Calcoco1	IDA		Mouse	MGI:MGI:3530629|PMID:14690606
Molecular Function	GO:0003712	transcription coregulator activity	CALCOCO1	IDA		Human	PMID:16344550
Cellular Component	GO:0000785	chromatin	Calcoco1	IDA		Mouse	PMID:15383530
Cellular Component	GO:0005829	cytosol	CALCOCO1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	CALCOCO1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	CALCOCO1	IDA		Human	GO_REF:0000054
Biological Process	GO:0030518	intracellular steroid hormone receptor signaling pathway	Calcoco1	IDA		Mouse	MGI:MGI:3530629|PMID:14690606
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	CALCOCO1	IMP		Human	PMID:16344550
Biological Process	GO:0010628	positive regulation of gene expression	CALCOCO1	IDA		Human	PMID:16344550
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Calcoco1	IDA		Mouse	MGI:MGI:3530629|PMID:14690606
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Calcoco1	IGI	MGI:MGI:105043	Mouse	PMID:15383530
Biological Process	GO:0007165	signal transduction	Calcoco1	IDA		Mouse	MGI:MGI:3530629|PMID:14690606

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern