Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CALU
  • Mouse genes Calu
  • Rat genes Calu
  • Zfish genes calua,calub
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Calu

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005509	calcium ion binding	CALU	IDA		Human	PMID:10094503
Molecular Function	GO:0005509	calcium ion binding	Calu	IDA		Mouse	PMID:9806833
Molecular Function	GO:0005509	calcium ion binding	Calu	IDA		Mouse	PMID:9218460
Molecular Function	GO:0005509	calcium ion binding	Calu	IDA		Rat	PMID:8416973|RGD:633877
Molecular Function	GO:0019899	enzyme binding	Calu	IDA		Rat	PMID:15075329|RGD:1600458
Molecular Function	GO:0004857	enzyme inhibitor activity	Calu	IDA		Rat	PMID:15075329|RGD:1600458
Molecular Function	GO:0005515	protein binding	CALU	IPI	UniProtKB:P07996	Human	PMID:18688696
Molecular Function	GO:0005515	protein binding	CALU	IPI	UniProtKB:Q9UMX0-2	Human	PMID:25416956
Cellular Component	GO:0005783	endoplasmic reticulum	CALU	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005783	endoplasmic reticulum	Calu	IDA		Mouse	PMID:9218460
Cellular Component	GO:0005788	endoplasmic reticulum lumen	Calu	IDA		Rat	PMID:8416973|RGD:633877
Cellular Component	GO:0005789	endoplasmic reticulum membrane	CALU	IDA		Human	PMID:10222138
Cellular Component	GO:0005576	extracellular region	CALU	IDA		Human	PMID:10222138
Cellular Component	GO:0005794	Golgi apparatus	CALU	IDA		Human	PMID:10222138
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	Calu	IDA		Rat	PMID:15075329|RGD:1600458
Cellular Component	GO:0016020	membrane	CALU	HDA		Human	PMID:19946888
Biological Process	GO:0014012	peripheral nervous system axon regeneration	Calu	IEP		Rat	PMID:15509515|RGD:2316214
Biological Process	GO:0014070	response to organic cyclic compound	Calu	IEP		Rat	PMID:17994578|RGD:2316211

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern