Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CAVIN1
  • Mouse genes Cavin1
  • Rat genes Cavin1
  • Zfish genes cavin1a,cavin1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cavin1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	CAVIN1	IPI	UniProtKB:Q6NZI2	Human	PMID:24013648
Molecular Function	GO:0042802	identical protein binding	CAVIN1	IPI	UniProtKB:Q6NZI2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CAVIN1	IPI	UniProtKB:Q05469	Human	PMID:17026959
Molecular Function	GO:0005515	protein binding	CAVIN1	IPI	UniProtKB:O95810	Human	PMID:19525939
Molecular Function	GO:0005515	protein binding	CAVIN1	IPI	UniProtKB:P56539	Human	PMID:19726876
Molecular Function	GO:0005515	protein binding	CAVIN1	IPI	UniProtKB:Q03135	Human	PMID:19726876
Molecular Function	GO:0005515	protein binding	CAVIN1	IPI	UniProtKB:O95810	Human	PMID:24013648
Molecular Function	GO:0005515	protein binding	CAVIN1	IPI	UniProtKB:Q03135	Human	PMID:24013648
Molecular Function	GO:0005515	protein binding	CAVIN1	IPI	UniProtKB:Q969G5	Human	PMID:24013648
Molecular Function	GO:0005515	protein binding	CAVIN1	IPI	UniProtKB:O95810	Human	PMID:24567387
Molecular Function	GO:0005515	protein binding	CAVIN1	IPI	UniProtKB:P56539	Human	PMID:24567387
Molecular Function	GO:0005515	protein binding	CAVIN1	IPI	UniProtKB:Q5BKX8	Human	PMID:24567387
Molecular Function	GO:0005515	protein binding	CAVIN1	IPI	UniProtKB:P56539	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	CAVIN1	IPI	UniProtKB:Q9NVF7	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	CAVIN1	IPI	UniProtKB:Q16543	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CAVIN1	IPI	UniProtKB:Q3SY00	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CAVIN1	IPI	UniProtKB:Q5MJ09	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CAVIN1	IPI	UniProtKB:Q5MJ10	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CAVIN1	IPI	UniProtKB:Q5QJE6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CAVIN1	IPI	UniProtKB:Q6P2D0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CAVIN1	IPI	UniProtKB:Q8IY57-5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CAVIN1	IPI	UniProtKB:Q8N0Z6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CAVIN1	IPI	UniProtKB:Q8TBK6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CAVIN1	IPI	UniProtKB:Q8WVP5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CAVIN1	IPI	UniProtKB:Q92993	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CAVIN1	IPI	UniProtKB:Q969G5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CAVIN1	IPI	UniProtKB:Q96GN5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CAVIN1	IPI	UniProtKB:Q9BRJ2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CAVIN1	IPI	UniProtKB:Q9C086	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CAVIN1	IPI	UniProtKB:Q9NVF7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CAVIN1	IPI	UniProtKB:Q9Y5A6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Cavin1	IPI	UniProtKB:Q62187	Mouse	MGI:MGI:5806011|PMID:27528195
Molecular Function	GO:0005515	protein binding	Cavin1	IPI	UniProtKB:Q03135|UniProtKB:Q63918|UniProtKB:Q91VJ2	Mouse	MGI:MGI:5902673|PMID:25588833
Molecular Function	GO:0005515	protein binding	Cavin1	IPI	RGD:2280	Rat	PMID:23941874|RGD:9588563
Molecular Function	GO:0003723	RNA binding	CAVIN1	HDA		Human	PMID:22658674
Molecular Function	GO:0042134	rRNA primary transcript binding	CAVIN1	IDA		Human	PMID:9582279
Molecular Function	GO:0042134	rRNA primary transcript binding	Cavin1	IDA		Mouse	PMID:9582279
Molecular Function	GO:0008307	structural constituent of muscle	cavin1a	IMP	ZFIN:ZDB-MRPHLNO-151230-1	Zfish	PMID:26323694
Cellular Component	GO:0005901	caveola	CAVIN1	IDA		Human	PMID:17026959
Cellular Component	GO:0005901	caveola	CAVIN1	IDA		Human	PMID:19525939
Cellular Component	GO:0005901	caveola	CAVIN1	IDA		Human	PMID:24013648
Cellular Component	GO:0005901	caveola	Cavin1	IDA		Mouse	MGI:MGI:3773762|PMID:18191225
Cellular Component	GO:0005901	caveola	Cavin1	IDA		Mouse	MGI:MGI:5634260|PMID:25514038
Cellular Component	GO:0005901	caveola	Cavin1	IDA		Rat	PMID:16236245|RGD:8553547
Cellular Component	GO:0005737	cytoplasm	CAVIN1	IDA		Human	PMID:17026959
Cellular Component	GO:0005783	endoplasmic reticulum	Cavin1	IDA		Mouse	MGI:MGI:6271778|PMID:30188967
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	CAVIN1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0045121	membrane raft	CAVIN1	IDA		Human	PMID:25204797
Cellular Component	GO:0005739	mitochondrion	CAVIN1	IDA		Human	PMID:15242332
Cellular Component	GO:0005634	nucleus	CAVIN1	IDA		Human	PMID:15242332
Cellular Component	GO:0005634	nucleus	Cavin1	IDA		Mouse	MGI:MGI:5634260|PMID:25514038
Cellular Component	GO:0005634	nucleus	Cavin1	IDA		Mouse	MGI:MGI:5806011|PMID:27528195
Cellular Component	GO:0005886	plasma membrane	CAVIN1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0032991	protein-containing complex	CAVIN1	IDA		Human	PMID:24013648
Biological Process	GO:0030903	notochord development	cavin1b	IMP	ZFIN:ZDB-MRPHLNO-080324-1	Zfish	PMID:18191225
Biological Process	GO:2000147	positive regulation of cell motility	Cavin1	IMP		Mouse	MGI:MGI:5634260|PMID:25514038
Biological Process	GO:0009306	protein secretion	Cavin1	IMP		Mouse	MGI:MGI:6271778|PMID:30188967
Biological Process	GO:0009303	rRNA transcription	Cavin1	IMP		Mouse	MGI:MGI:5806011|PMID:27528195
Biological Process	GO:0006363	termination of RNA polymerase I transcription	CAVIN1	IDA		Human	PMID:9582279
Biological Process	GO:0006363	termination of RNA polymerase I transcription	Cavin1	IDA		Mouse	PMID:9582279
Biological Process	GO:0006361	transcription initiation at RNA polymerase I promoter	CAVIN1	IDA		Human	PMID:9582279
Biological Process	GO:0006361	transcription initiation at RNA polymerase I promoter	Cavin1	IDA		Mouse	MGI:MGI:3711373|PMID:11139612

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern