Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CCDC47
  • Mouse genes Ccdc47
  • Rat genes Ccdc47
  • Zfish genes ccdc47
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ccdc47

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005509	calcium ion binding	Ccdc47	IDA		Mouse	PMID:17204322
Molecular Function	GO:0005515	protein binding	CCDC47	IPI	UniProtKB:P58753	Human	PMID:21903422
Molecular Function	GO:0005515	protein binding	CCDC47	IPI	UniProtKB:Q6PDS3	Human	PMID:21903422
Molecular Function	GO:0005515	protein binding	CCDC47	IPI	UniProtKB:Q86WV6	Human	PMID:21903422
Molecular Function	GO:0005515	protein binding	CCDC47	IPI	UniProtKB:Q92985	Human	PMID:21903422
Molecular Function	GO:0005515	protein binding	CCDC47	IPI	UniProtKB:Q99J34	Human	PMID:21903422
Molecular Function	GO:0005515	protein binding	CCDC47	IPI	UniProtKB:P17252	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	CCDC47	IPI	UniProtKB:P61981	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	CCDC47	IPI	UniProtKB:Q15047-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	CCDC47	IPI	UniProtKB:Q8TAP4-4	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	CCDC47	IPI	UniProtKB:Q92993	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	CCDC47	IPI	UniProtKB:Q9Y284	Human	PMID:32814900
Molecular Function	GO:0005515	protein binding	CCDC47	IPI	UniProtKB:P60059,UniProtKB:P60468,UniProtKB:P61619,UniProtKB:P69849,UniProtKB:Q15155,UniProtKB:Q5JPE7,UniProtKB:Q969V3,UniProtKB:Q9BVK8,UniProtKB:Q9UM00	Human	PMID:32820719
Molecular Function	GO:0005515	protein binding	Ccdc47	IPI	UniProtKB:P20029|UniProtKB:Q01853|UniProtKB:Q8BNI4|UniProtKB:Q99J56|UniProtKB:Q9BCZ4	Mouse	MGI:MGI:5605216|PMID:25009997
Molecular Function	GO:0044183	protein folding chaperone	CCDC47	IDA		Human	PMID:32814900
Molecular Function	GO:0043022	ribosome binding	CCDC47	IDA		Human	PMID:32820719
Molecular Function	GO:0003723	RNA binding	CCDC47	HDA		Human	PMID:22658674
Cellular Component	GO:0005783	endoplasmic reticulum	CCDC47	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005783	endoplasmic reticulum	Ccdc47	IDA		Mouse	PMID:17204322
Cellular Component	GO:0005789	endoplasmic reticulum membrane	CCDC47	IDA		Human	PMID:32814900
Cellular Component	GO:0016020	membrane	CCDC47	HDA		Human	PMID:16210410
Cellular Component	GO:0016020	membrane	CCDC47	HDA		Human	PMID:19946888
Cellular Component	GO:0160064	multi-pass translocon complex	CCDC47	IDA		Human	PMID:36261522
Cellular Component	GO:0101031	protein folding chaperone complex	CCDC47	IPI		Human	PMID:32814900
Cellular Component	GO:0005791	rough endoplasmic reticulum	Ccdc47	IDA		Mouse	PMID:25009997
Biological Process	GO:0055074	calcium ion homeostasis	Ccdc47	IMP		Mouse	PMID:17204322
Biological Process	GO:0009790	embryo development	Ccdc47	IMP		Mouse	PMID:17204322
Biological Process	GO:0032469	endoplasmic reticulum calcium ion homeostasis	CCDC47	IMP		Human	PMID:30401460
Biological Process	GO:0007029	endoplasmic reticulum organization	Ccdc47	IMP	MGI:MGI:3722141	Mouse	PMID:25009997
Biological Process	GO:0006983	ER overload response	Ccdc47	IMP		Mouse	PMID:17204322
Biological Process	GO:0036503	ERAD pathway	CCDC47	IMP		Human	PMID:25009997
Biological Process	GO:0160063	multi-pass transmembrane protein insertion into ER membrane	CCDC47	IDA		Human	PMID:36261522
Biological Process	GO:0001649	osteoblast differentiation	CCDC47	HDA		Human	PMID:16210410
Biological Process	GO:0009791	post-embryonic development	Ccdc47	IMP		Mouse	PMID:17204322
Biological Process	GO:0045048	protein insertion into ER membrane	CCDC47	IDA		Human	PMID:32814900
Biological Process	GO:0030433	ubiquitin-dependent ERAD pathway	Ccdc47	IMP	MGI:MGI:3722141	Mouse	PMID:25009997

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern