Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CCDC80
  • Mouse genes Ccdc80
  • Rat genes Ccdc80
  • Zfish genes ccdc80
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ccdc80

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0001968	fibronectin binding	Ccdc80	IDA		Mouse	PMID:18757743
Molecular Function	GO:0005539	glycosaminoglycan binding	Ccdc80	IDA		Mouse	PMID:18757743
Molecular Function	GO:0008201	heparin binding	Ccdc80	IDA		Mouse	PMID:18757743
Cellular Component	GO:0005604	basement membrane	Ccdc80	IDA		Mouse	PMID:18757743
Cellular Component	GO:0031012	extracellular matrix	Ccdc80	IDA		Mouse	PMID:18757743
Cellular Component	GO:0005614	interstitial matrix	Ccdc80	IDA		Mouse	PMID:18757743
Biological Process	GO:0030198	extracellular matrix organization	Ccdc80	IDA		Mouse	PMID:18757743
Biological Process	GO:0010811	positive regulation of cell-substrate adhesion	Ccdc80	IDA		Mouse	PMID:18757743
Biological Process	GO:0003073	regulation of systemic arterial blood pressure	ccdc80	IMP	ZFIN:ZDB-CRISPR-160907-1	Zfish	PMID:27375481
Biological Process	GO:0009617	response to bacterium	Ccdc80	IEP		Mouse	PMID:23012479
Biological Process	GO:0001756	somitogenesis	ccdc80	IMP	ZFIN:ZDB-MRPHLNO-140328-14	Zfish	PMID:25205658
Biological Process	GO:0001756	somitogenesis	ccdc80	IMP	ZFIN:ZDB-MRPHLNO-150916-7	Zfish	PMID:25205658

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern