Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CCL15,CCL23
  • Mouse genes Ccl6
  • Rat genes Ccl6
  • Zfish genes ccl35.1,ccl35.2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ccl6

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0031726	CCR1 chemokine receptor binding	CCL23	IPI	UniProtKB:P32246	Human	PMID:10660125
Molecular Function	GO:0042056	chemoattractant activity	CCL15	IDA		Human	PMID:15001559
Molecular Function	GO:0008009	chemokine activity	CCL23	IDA		Human	PMID:10660125
Molecular Function	GO:0008009	chemokine activity	Ccl6	IDA		Rat	PMID:16087246|RGD:2303127
Biological Process	GO:0060326	cell chemotaxis	Ccl6	IDA		Rat	PMID:16087246|RGD:2303127
Biological Process	GO:0030316	osteoclast differentiation	Ccl6	HEP		Rat	PMID:16304045|RGD:151665775

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern