Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CCNY
  • Mouse genes Ccny
  • Rat genes Ccny
  • Zfish genes ccny
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ccny

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	CCNY	IDA		Human	PMID:19524571
Molecular Function	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	CCNY	IDA		Human	PMID:20059949
Molecular Function	GO:0005515	protein binding	CCNY	IPI	UniProtKB:O94921	Human	PMID:19524571
Molecular Function	GO:0005515	protein binding	CCNY	IPI	UniProtKB:O75581	Human	PMID:20059949
Molecular Function	GO:0005515	protein binding	CCNY	IPI	UniProtKB:O94921	Human	PMID:20059949
Molecular Function	GO:0005515	protein binding	CCNY	IPI	UniProtKB:Q13616	Human	PMID:24794231
Molecular Function	GO:0005515	protein binding	Ccny	IPI	UniProtKB:Q04735	Mouse	MGI:MGI:5319028|PMID:22184064
Molecular Function	GO:0005515	protein binding	Ccny	IPI	UniProtKB:Q04735	Mouse	MGI:MGI:5688365|PMID:26305884
Cellular Component	GO:0000307	cyclin-dependent protein kinase holoenzyme complex	CCNY	IPI		Human	PMID:19524571
Cellular Component	GO:0000307	cyclin-dependent protein kinase holoenzyme complex	Ccny	IPI		Mouse	MGI:MGI:3851889|PMID:19524571
Cellular Component	GO:0000308	cytoplasmic cyclin-dependent protein kinase holoenzyme complex	CCNY	IDA		Human	PMID:19524571
Cellular Component	GO:0000308	cytoplasmic cyclin-dependent protein kinase holoenzyme complex	CCNY	IDA		Human	PMID:20059949
Cellular Component	GO:0005730	nucleolus	CCNY	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	CCNY	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	CCNY	IDA		Human	GO_REF:0000054
Cellular Component	GO:0005886	plasma membrane	CCNY	IDA		Human	PMID:19524571
Cellular Component	GO:0005886	plasma membrane	CCNY	IDA		Human	PMID:20059949
Biological Process	GO:0000086	G2/M transition of mitotic cell cycle	CCNY	IDA		Human	PMID:20059949
Biological Process	GO:0010508	positive regulation of autophagy	CCNY	IDA		Human	PMID:32098961
Biological Process	GO:0045737	positive regulation of cyclin-dependent protein serine/threonine kinase activity	CCNY	IDA		Human	PMID:19524571
Biological Process	GO:0045737	positive regulation of cyclin-dependent protein serine/threonine kinase activity	CCNY	IDA		Human	PMID:20059949
Biological Process	GO:0060828	regulation of canonical Wnt signaling pathway	CCNY	IDA		Human	PMID:20059949
Biological Process	GO:0001878	response to yeast	ccny	IDA		Zfish	PMID:23947337

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern