Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CCS
  • Mouse genes Ccs
  • Rat genes Ccs
  • Zfish genes ccs
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ccs

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0045296	cadherin binding	CCS	HDA		Human	PMID:25468996
Molecular Function	GO:0005507	copper ion binding	CCS	IDA		Human	PMID:9726962
Molecular Function	GO:0019899	enzyme binding	Ccs	IDA		Rat	PMID:10964676|RGD:2300392
Molecular Function	GO:0005515	protein binding	CCS	IPI	UniProtKB:P00441	Human	PMID:12968035
Molecular Function	GO:0005515	protein binding	CCS	IPI	UniProtKB:P98170	Human	PMID:20154138
Molecular Function	GO:0005515	protein binding	CCS	IPI	UniProtKB:P00441	Human	PMID:22508683
Molecular Function	GO:0005515	protein binding	CCS	IPI	UniProtKB:P98170	Human	PMID:22508683
Molecular Function	GO:0005515	protein binding	CCS	IPI	UniProtKB:P00441	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	CCS	IPI	UniProtKB:P00441	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	CCS	IPI	UniProtKB:Q9NWV4	Human	PMID:30260988
Molecular Function	GO:0005515	protein binding	CCS	IPI	UniProtKB:O15431	Human	PMID:31292775
Molecular Function	GO:0005515	protein binding	CCS	IPI	UniProtKB:O15431,UniProtKB:P00441	Human	PMID:31292775
Molecular Function	GO:0005515	protein binding	CCS	IPI	UniProtKB:P00441	Human	PMID:31292775
Molecular Function	GO:0005515	protein binding	CCS	IPI	UniProtKB:P00441	Human	PMID:9726962
Cellular Component	GO:0005737	cytoplasm	CCS	IDA		Human	PMID:9726962
Cellular Component	GO:0005634	nucleus	CCS	IDA		Human	PMID:9726962
Biological Process	GO:0051353	positive regulation of oxidoreductase activity	Ccs	IMP	MGI:MGI:2446505	Mouse	PMID:12968068

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern