Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CD300LD
  • Mouse genes Cd300ld3
  • Rat genes Cd300le
  • Zfish genes si:ch211-114l13.12
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cd300ld3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CD300LD	IPI	UniProtKB:P04155	Human	PMID:21982860
Molecular Function	GO:0005515	protein binding	CD300LD	IPI	UniProtKB:A8K4G0	Human	PMID:22291008
Molecular Function	GO:0005515	protein binding	CD300LD	IPI	UniProtKB:A8K4G0	Human	PMID:29051512
Molecular Function	GO:0005515	protein binding	Cd300ld3	IPI	PR:Q9EQU3	Mouse	PMID:21940676
Cellular Component	GO:0005768	endosome	Cd300ld3	IDA		Mouse	PMID:21940676
Cellular Component	GO:0005764	lysosome	Cd300ld3	IDA		Mouse	PMID:21940676
Biological Process	GO:0031398	positive regulation of protein ubiquitination	Cd300ld3	IDA		Mouse	PMID:21940676
Biological Process	GO:0034165	positive regulation of toll-like receptor 9 signaling pathway	Cd300ld3	IMP		Mouse	PMID:21940676
Biological Process	GO:0034165	positive regulation of toll-like receptor 9 signaling pathway	Cd300ld3	IDA		Mouse	PMID:21940676
Biological Process	GO:0034162	toll-like receptor 9 signaling pathway	Cd300ld3	IDA		Mouse	PMID:21940676
Biological Process	GO:0034162	toll-like receptor 9 signaling pathway	Cd300ld3	IMP		Mouse	PMID:21940676

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern