Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CD48
  • Mouse genes Cd48
  • Rat genes Cd48
  • Zfish genes si:ch211-209f23.6
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cd48

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CD48	IPI	UniProtKB:P06729	Human	PMID:12356317
Molecular Function	GO:0005515	protein binding	CD48	IPI	UniProtKB:Q9BZW8	Human	PMID:15153464
Molecular Function	GO:0005515	protein binding	CD48	IPI	UniProtKB:Q9BZW8	Human	PMID:16002700
Molecular Function	GO:0005515	protein binding	CD48	IPI	UniProtKB:Q9BZW8	Human	PMID:18296487
Molecular Function	GO:0005515	protein binding	Cd48	IPI	PR:P08920	Mouse	PMID:1383383
Molecular Function	GO:0005515	protein binding	Cd48	IPI	RGD:2297	Rat	PMID:9576909|RGD:1625383
Cellular Component	GO:0009897	external side of plasma membrane	Cd48	IDA		Mouse	PMID:18971422
Cellular Component	GO:0009897	external side of plasma membrane	Cd48	IDA		Mouse	PMID:1383383
Cellular Component	GO:0009897	external side of plasma membrane	Cd48	IDA		Mouse	PMID:20660734
Cellular Component	GO:0070062	extracellular exosome	CD48	HDA		Human	PMID:20458337
Cellular Component	GO:0016020	membrane	CD48	HDA		Human	PMID:19946888
Cellular Component	GO:0045121	membrane raft	CD48	IDA		Human	PMID:11313396
Cellular Component	GO:0005886	plasma membrane	Cd48	IDA		Rat	PMID:12759438|RGD:1299282
Cellular Component	GO:0032991	protein-containing complex	Cd48	IDA		Rat	PMID:9576909|RGD:1625383
Biological Process	GO:0045576	mast cell activation	Cd48	IMP		Rat	PMID:12759438|RGD:1299282
Biological Process	GO:0007165	signal transduction	Cd48	IDA		Mouse	PMID:1383383
Biological Process	GO:0042110	T cell activation	Cd48	IDA		Mouse	PMID:1383383

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern