Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CDA
  • Mouse genes Cda
  • Rat genes Cda
  • Zfish genes cdaa,cdab
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cda

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004126	cytidine deaminase activity	CDA	IDA		Human	PMID:7923172
Molecular Function	GO:0004126	cytidine deaminase activity	CDA	IDA		Human	PMID:9596658
Molecular Function	GO:0004126	cytidine deaminase activity	Cda	IDA		Mouse	PMID:16784234
Molecular Function	GO:0004126	cytidine deaminase activity	Cda	IDA		Mouse	PMID:5651639
Molecular Function	GO:0004126	cytidine deaminase activity	Cda	IDA		Rat	PMID:675715|RGD:2316616
Molecular Function	GO:0042802	identical protein binding	CDA	IPI	UniProtKB:P32320	Human	PMID:31515488
Molecular Function	GO:0042802	identical protein binding	CDA	IPI	UniProtKB:P32320	Human	PMID:32296183
Molecular Function	GO:0042802	identical protein binding	CDA	IPI	UniProtKB:P32320	Human	PMID:9596658
Molecular Function	GO:0042802	identical protein binding	Cda	IPI	PR:P56389	Mouse	PMID:11591653
Molecular Function	GO:0001882	nucleoside binding	CDA	IDA		Human	PMID:15689149
Molecular Function	GO:0005515	protein binding	CDA	IPI	UniProtKB:O00560	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CDA	IPI	UniProtKB:O43167	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CDA	IPI	UniProtKB:P25786	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CDA	IPI	UniProtKB:P43115-12	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CDA	IPI	UniProtKB:Q8TBB1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CDA	IPI	UniProtKB:Q96CS7	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CDA	IPI	UniProtKB:Q96HA8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CDA	IPI	UniProtKB:Q9BVV2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CDA	IPI	UniProtKB:Q8TBB1	Human	PMID:25910212
Molecular Function	GO:0005515	protein binding	CDA	IPI	UniProtKB:Q96HA8	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	CDA	IPI	UniProtKB:O00560	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CDA	IPI	UniProtKB:O15353	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CDA	IPI	UniProtKB:O43167	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CDA	IPI	UniProtKB:Q0VD86	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CDA	IPI	UniProtKB:Q3LI64	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CDA	IPI	UniProtKB:Q8IUC2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CDA	IPI	UniProtKB:Q8TBB1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CDA	IPI	UniProtKB:Q96B67	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CDA	IPI	UniProtKB:Q96CS7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CDA	IPI	UniProtKB:Q96D03	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CDA	IPI	UniProtKB:Q96EY9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CDA	IPI	UniProtKB:Q96HA8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CDA	IPI	UniProtKB:Q9BVV2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CDA	IPI	UniProtKB:Q9H8Y8	Human	PMID:32296183
Molecular Function	GO:0042803	protein homodimerization activity	CDA	IDA		Human	PMID:15689149
Molecular Function	GO:0008270	zinc ion binding	CDA	IDA		Human	PMID:15689149
Cellular Component	GO:0005829	cytosol	CDA	IDA		Human	PMID:9596658
Cellular Component	GO:0005829	cytosol	Cda	IDA		Mouse	PMID:5651639
Cellular Component	GO:0005829	cytosol	Cda	IDA		Rat	PMID:675715|RGD:2316616
Biological Process	GO:0071217	cellular response to external biotic stimulus	Cda	IEP		Rat	PMID:16353156|RGD:2316359
Biological Process	GO:0009972	cytidine deamination	CDA	IDA		Human	PMID:9596658
Biological Process	GO:0009972	cytidine deamination	Cda	IDA		Rat	PMID:675715|RGD:2316616
Biological Process	GO:0030308	negative regulation of cell growth	CDA	IDA		Human	PMID:9596658
Biological Process	GO:0045980	negative regulation of nucleotide metabolic process	CDA	IDA		Human	PMID:9596658
Biological Process	GO:0046898	response to cycloheximide	Cda	IEP		Rat	PMID:675715|RGD:2316616
Biological Process	GO:0044206	UMP salvage	Cda	IDA		Mouse	PMID:6498945

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern