Comparative GO Graph (mouse, human, rat, zebrafish)

Source

Alliance of Genome Resources

Compare experimental GO annotations for Human-Mouse-Rat-Zebrafish orthologs to Mouse Cdh23

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

This class contains
- Human genes CDH23
- Mouse genes Cdh23
- Rat genes Cdh23
- Zfish genes cdh23
Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cdh23

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CDH23	IPI	UniProtKB:Q9ES64	Human	PMID:12485990
Molecular Function	GO:0005515	protein binding	Cdh23	IPI	UniProtKB:Q99PJ1	Mouse	MGI:MGI:3839497\|PMID:19270079
Molecular Function	GO:0005515	protein binding	Cdh23	IPI	UniProtKB:Q99PJ1	Mouse	MGI:MGI:3758173\|PMID:17805295
Molecular Function	GO:0005515	protein binding	Cdh23	IPI	UniProtKB:Q99PJ1	Mouse	MGI:MGI:5915196\|PMID:20498078
Molecular Function	GO:0005515	protein binding	Cdh23	IPI	UniProtKB:Q99PJ1	Mouse	MGI:MGI:5466625\|PMID:23135401
Molecular Function	GO:0005515	protein binding	Cdh23	IPI	UniProtKB:Q9ES64-3	Mouse	MGI:MGI:3583725\|PMID:15928608
Molecular Function	GO:0005515	protein binding	Cdh23	IPI	PR:P70441	Mouse	PMID:24920589
Molecular Function	GO:0005515	protein binding	Cdh23	IPI	PR:Q9ES64	Mouse	PMID:15590703
Molecular Function	GO:0005515	protein binding	Cdh23	IPI	PR:Q9ES64	Mouse	PMID:12485990
Molecular Function	GO:0005515	protein binding	Cdh23	IPI	RGD:70948	Rat	PMID:23329832\|RGD:8662293
Molecular Function	GO:0022857	transmembrane transporter activity	cdh23	IMP	ZFIN:ZDB-GENO-121220-4	Zfish	PMID:23071446
Cellular Component	GO:0045177	apical part of cell	Cdh23	IDA		Rat	PMID:15882573\|RGD:1358496
Cellular Component	GO:0005813	centrosome	Cdh23	IDA		Mouse	PMID:15882574
Cellular Component	GO:0005929	cilium	cdh23	IDA		Zfish	PMID:15057246
Cellular Component	GO:0098683	cochlear hair cell ribbon synapse	Cdh23	IDA		Mouse	PMID:19756182
Cellular Component	GO:0060091	kinocilium	Cdh23	IDA		Mouse	PMID:15882574
Cellular Component	GO:0001917	photoreceptor inner segment	Cdh23	IDA		Mouse	PMID:14578428
Cellular Component	GO:0098684	photoreceptor ribbon synapse	Cdh23	IDA		Mouse	PMID:19756182
Cellular Component	GO:0032420	stereocilium	Cdh23	IDA		Mouse	MGI:MGI:2447265\|PMID:12485990
Cellular Component	GO:0032420	stereocilium	Cdh23	IDA		Mouse	PMID:17050716
Cellular Component	GO:0032420	stereocilium	Cdh23	IDA		Mouse	PMID:16481439
Cellular Component	GO:0032420	stereocilium	Cdh23	IDA		Mouse	PMID:15882574
Cellular Component	GO:0032426	stereocilium tip	Cdh23	IDA		Mouse	PMID:17050716
Cellular Component	GO:0032426	stereocilium tip	Cdh23	IDA		Mouse	PMID:24920589
Cellular Component	GO:0032426	stereocilium tip	Cdh23	IDA		Mouse	PMID:12485990
Cellular Component	GO:0045202	synapse	Cdh23	IDA		Mouse	PMID:14578428
Cellular Component	GO:0045202	synapse	Cdh23	IDA		Mouse	PMID:19756182
Biological Process	GO:0008344	adult locomotory behavior	Cdh23	IMP	MGI:MGI:1856681	Mouse	MGI:MGI:79257
Biological Process	GO:0060117	auditory receptor cell development	cdh23	IMP	ZFIN:ZDB-GENO-111122-3	Zfish	PMID:23052906
Biological Process	GO:0060117	auditory receptor cell development	cdh23	IMP	ZFIN:ZDB-GENO-121220-3	Zfish	PMID:23052906
Biological Process	GO:0060088	auditory receptor cell stereocilium organization	Cdh23	IMP	MGI:MGI:2154548	Mouse	PMID:17050716
Biological Process	GO:0060088	auditory receptor cell stereocilium organization	Cdh23	IGI	MGI:MGI:1891428	Mouse	PMID:15537665
Biological Process	GO:0060088	auditory receptor cell stereocilium organization	Cdh23	IMP	MGI:MGI:2154548	Mouse	PMID:11138008
Biological Process	GO:0060088	auditory receptor cell stereocilium organization	Cdh23	IMP	MGI:MGI:2154549	Mouse	PMID:11322776
Biological Process	GO:0060088	auditory receptor cell stereocilium organization	Cdh23	IMP	MGI:MGI:1856681	Mouse	PMID:7610888
Biological Process	GO:0060088	auditory receptor cell stereocilium organization	Cdh23	IMP	MGI:MGI:2154548	Mouse	PMID:23217710
Biological Process	GO:0060088	auditory receptor cell stereocilium organization	Cdh23	IMP	MGI:MGI:1856228	Mouse	PMID:12121736
Biological Process	GO:0060088	auditory receptor cell stereocilium organization	Cdh23	IMP	MGI:MGI:1856681	Mouse	PMID:8790740
Biological Process	GO:0060088	auditory receptor cell stereocilium organization	Cdh23	IMP	MGI:MGI:1856681	Mouse	PMID:9039475
Biological Process	GO:0006816	calcium ion transport	CDH23	IMP		Human	PMID:17234811
Biological Process	GO:0030030	cell projection organization	cdh23	IMP	ZFIN:ZDB-GENO-050819-5	Zfish	PMID:15057246
Biological Process	GO:0050974	detection of mechanical stimulus involved in sensory perception	cdh23	IMP		Zfish	PMID:9491988
Biological Process	GO:0050910	detection of mechanical stimulus involved in sensory perception of sound	cdh23	IMP	ZFIN:ZDB-GENO-120828-7	Zfish	PMID:29269857
Biological Process	GO:0006897	endocytosis	cdh23	IMP		Zfish	PMID:10526320
Biological Process	GO:0050957	equilibrioception	CDH23	IMP		Human	PMID:16679490
Biological Process	GO:0050957	equilibrioception	cdh23	IMP	ZFIN:ZDB-GENO-050819-5	Zfish	PMID:15057246
Biological Process	GO:0035315	hair cell differentiation	cdh23	IMP		Zfish	PMID:10526320
Biological Process	GO:0042491	inner ear auditory receptor cell differentiation	Cdh23	IMP	MGI:MGI:1856228	Mouse	PMID:12121736
Biological Process	GO:0048839	inner ear development	Cdh23	IMP	MGI:MGI:3028349	Mouse	PMID:14759567
Biological Process	GO:0048839	inner ear development	Cdh23	IMP	MGI:MGI:1856681	Mouse	PMID:8790740
Biological Process	GO:0048839	inner ear development	Cdh23	IMP	MGI:MGI:1856228	Mouse	PMID:13336002
Biological Process	GO:0048839	inner ear development	Cdh23	IMP	MGI:MGI:1856681	Mouse	MGI:MGI:79257
Biological Process	GO:0042472	inner ear morphogenesis	Cdh23	IMP	MGI:MGI:1856229	Mouse	MGI:MGI:61210
Biological Process	GO:0042472	inner ear morphogenesis	Cdh23	IMP	MGI:MGI:2665714	Mouse	PMID:15925194
Biological Process	GO:0042472	inner ear morphogenesis	Cdh23	IMP	MGI:MGI:1856681	Mouse	PMID:7610888
Biological Process	GO:0060122	inner ear receptor cell stereocilium organization	Cdh23	IMP	MGI:MGI:2154548	Mouse	PMID:18339676
Biological Process	GO:0060122	inner ear receptor cell stereocilium organization	cdh23	IMP		Zfish	PMID:9491988
Biological Process	GO:0060122	inner ear receptor cell stereocilium organization	cdh23	IMP		Zfish	PMID:24626987
Biological Process	GO:0007626	locomotory behavior	Cdh23	IMP	MGI:MGI:2154547	Mouse	PMID:16962269
Biological Process	GO:0007626	locomotory behavior	Cdh23	IMP	MGI:MGI:1856681	Mouse	PMID:10452381
Biological Process	GO:0007626	locomotory behavior	Cdh23	IMP	MGI:MGI:1856412	Mouse	PMID:11386759
Biological Process	GO:0007626	locomotory behavior	Cdh23	IMP	MGI:MGI:2154548	Mouse	PMID:16962269
Biological Process	GO:0035678	neuromast hair cell morphogenesis	cdh23	IMP	ZFIN:ZDB-GENO-121220-3	Zfish	PMID:23052906
Biological Process	GO:0035678	neuromast hair cell morphogenesis	cdh23	IMP	ZFIN:ZDB-GENO-111122-3	Zfish	PMID:23052906
Biological Process	GO:0045494	photoreceptor cell maintenance	CDH23	IMP		Human	PMID:16679490
Biological Process	GO:0048563	post-embryonic animal organ morphogenesis	Cdh23	IMP	MGI:MGI:1856228	Mouse	PMID:13336002
Biological Process	GO:0061512	protein localization to cilium	cdh23	IMP	ZFIN:ZDB-GENO-171005-6	Zfish	PMID:28219986
Biological Process	GO:0051480	regulation of cytosolic calcium ion concentration	CDH23	IMP		Human	PMID:17234811
Biological Process	GO:0060013	righting reflex	Cdh23	IMP	MGI:MGI:1856681	Mouse	MGI:MGI:79257
Biological Process	GO:0050953	sensory perception of light stimulus	CDH23	IMP		Human	PMID:16679490
Biological Process	GO:0050953	sensory perception of light stimulus	Cdh23	IMP	MGI:MGI:1856228	Mouse	PMID:14609561
Biological Process	GO:0007605	sensory perception of sound	CDH23	IMP		Human	PMID:15537665
Biological Process	GO:0007605	sensory perception of sound	CDH23	IMP		Human	PMID:16679490
Biological Process	GO:0007605	sensory perception of sound	CDH23	IMP		Human	PMID:17234811
Biological Process	GO:0007605	sensory perception of sound	Cdh23	IMP	MGI:MGI:1856228	Mouse	PMID:13336002
Biological Process	GO:0007605	sensory perception of sound	Cdh23	IMP	MGI:MGI:3028349	Mouse	PMID:14759567
Biological Process	GO:0007605	sensory perception of sound	Cdh23	IMP	MGI:MGI:3028349	Mouse	PMID:15820310
Biological Process	GO:0007605	sensory perception of sound	Cdh23	IMP	MGI:MGI:2154549	Mouse	PMID:11322776
Biological Process	GO:0007605	sensory perception of sound	Cdh23	IMP	MGI:MGI:1856681	Mouse	PMID:10452381
Biological Process	GO:0007605	sensory perception of sound	Cdh23	IGI	MGI:MGI:1891428	Mouse	PMID:15537665
Biological Process	GO:0007605	sensory perception of sound	Cdh23	IMP	MGI:MGI:3028349	Mouse	PMID:9447922
Biological Process	GO:0007605	sensory perception of sound	Cdh23	IMP	MGI:MGI:2154548	Mouse	PMID:11138008
Biological Process	GO:0007605	sensory perception of sound	Cdh23	IMP	MGI:MGI:3708379	Mouse	PMID:17329413
Biological Process	GO:0007605	sensory perception of sound	Cdh23	IMP	MGI:MGI:2665714	Mouse	PMID:15925194
Biological Process	GO:0007605	sensory perception of sound	Cdh23	IMP	MGI:MGI:1856228	Mouse	PMID:12121736
Biological Process	GO:0007605	sensory perception of sound	Cdh23	IGI	MGI:MGI:105368	Mouse	PMID:9325047
Biological Process	GO:0007605	sensory perception of sound	Cdh23	IMP	MGI:MGI:1856229	Mouse	MGI:MGI:61210
Biological Process	GO:0007605	sensory perception of sound	cdh23	IMP	ZFIN:ZDB-GENO-111122-3	Zfish	PMID:23052906
Biological Process	GO:0007605	sensory perception of sound	cdh23	IMP	ZFIN:ZDB-GENO-121220-3	Zfish	PMID:23052906
Biological Process	GO:0007605	sensory perception of sound	cdh23	IMP		Zfish	PMID:15057246
Biological Process	GO:0055085	transmembrane transport	cdh23	IMP	ZFIN:ZDB-GENO-121220-4	Zfish	PMID:23071446\|ZFIN:ZDB-PUB-121019-40

Gene Ontology Evidence Code Abbreviations:

EXP Inferred from experiment

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

HTP Inferred from High Throughput Experiment

HDA Inferred from High Throughput Direct Assay

HMP Inferred from High Throughput Mutant Phenotype

HGI Inferred from High Throughput Genetic Interaction

HEP Inferred from High Throughput Expression Pattern

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 11/12/2024 MGI 6.24

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023. Complete table of the annotations represented in this image is provided below.

Molecular Function

Cellular Component

Biological Process

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.