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Comparative GO Graph (mouse, human, rat, zebrafish)
Source
Alliance of Genome Resources

Compare experimental GO annotations for Human-Mouse-Rat-Zebrafish orthologs to Mouse Cdh6

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

Molecular Function


Cellular Component


Biological Process



Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cdh6
Category ID Classification term Gene Evidence Inferred from Organism Reference
Cellular ComponentGO:0030054cell junctionCDH6IDAHumanGO_REF:0000052
Cellular ComponentGO:0098978glutamatergic synapseCdh6IDAMousePMID:28957665
Cellular ComponentGO:0098978glutamatergic synapseCdh6IPIMousePMID:28957665
Cellular ComponentGO:0098978glutamatergic synapseCdh6IMPMousePMID:28957665
Cellular ComponentGO:0005654nucleoplasmCDH6IDAHumanGO_REF:0000052
Cellular ComponentGO:0005886plasma membraneCDH6IDAHumanGO_REF:0000052
Cellular ComponentGO:0005886plasma membraneCdh6IDAMousePMID:12139922
Cellular ComponentGO:0045202synapseCdh6IDAMousePMID:28957665
Cellular ComponentGO:0045202synapseCdh6IMPMousePMID:28957665
Biological ProcessGO:0061550cranial ganglion developmentcdh6IMPZFIN:ZDB-MRPHLNO-080910-1ZfishPMID:21584906
Biological ProcessGO:0021545cranial nerve developmentcdh6IMPZFIN:ZDB-MRPHLNO-080910-1ZfishPMID:21584906
Biological ProcessGO:0008585female gonad developmentCdh6IEPRatPMID:11803548|RGD:727630
Biological ProcessGO:0048890lateral line ganglion developmentcdh6IMPZFIN:ZDB-MRPHLNO-080910-1ZfishPMID:21584906
Biological ProcessGO:0007219Notch signaling pathwayCdh6IDAMousePMID:23117660
Biological ProcessGO:0048793pronephros developmentcdh6IMPZFIN:ZDB-MRPHLNO-070602-1ZfishPMID:17294363
Biological ProcessGO:0048793pronephros developmentcdh6IMPZFIN:ZDB-MRPHLNO-070602-2ZfishPMID:17294363
Biological ProcessGO:0060042retina morphogenesis in camera-type eyecdh6IMPZFIN:ZDB-MRPHLNO-070602-1ZfishPMID:18506771
Biological ProcessGO:0060042retina morphogenesis in camera-type eyecdh6IMPZFIN:ZDB-MRPHLNO-080910-1ZfishPMID:18506771
Biological ProcessGO:0099560synaptic membrane adhesionCdh6IDAMousePMID:28957665
Biological ProcessGO:0099560synaptic membrane adhesionCdh6IPIMousePMID:28957665
Biological ProcessGO:0099560synaptic membrane adhesionCdh6IMPMousePMID:28957665

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment
  IDA Inferred from direct assay
  IEP Inferred from expression pattern
  IGI Inferred from genetic interaction
  IMP Inferred from mutant phenotype
  IPI Inferred from physical interaction
  HTP Inferred from High Throughput Experiment
  HDA Inferred from High Throughput Direct Assay
  HMP Inferred from High Throughput Mutant Phenotype
  HGI Inferred from High Throughput Genetic Interaction
  HEP Inferred from High Throughput Expression Pattern

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory