Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CDH8
  • Mouse genes Cdh8
  • Rat genes Cdh8
  • Zfish genes cdh8
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cdh8

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	Cdh8	IPI	UniProtKB:P97291	Mouse	MGI:MGI:5918265|PMID:18682221
Cellular Component	GO:0043679	axon terminus	Cdh8	IDA		Mouse	PMID:17392463
Cellular Component	GO:0098978	glutamatergic synapse	Cdh8	IDA		Mouse	PMID:25158904
Cellular Component	GO:0005886	plasma membrane	CDH8	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043083	synaptic cleft	Cdh8	IDA		Mouse	PMID:17392463
Cellular Component	GO:0097060	synaptic membrane	Cdh8	IDA		Mouse	PMID:25158904
Biological Process	GO:0007268	chemical synaptic transmission	Cdh8	IMP	MGI:MGI:3707077	Mouse	PMID:17392463
Biological Process	GO:0050807	regulation of synapse organization	Cdh8	IDA		Mouse	PMID:25126785
Biological Process	GO:0050807	regulation of synapse organization	Cdh8	IMP		Mouse	PMID:25126785
Biological Process	GO:0009409	response to cold	Cdh8	IMP	MGI:MGI:3707077	Mouse	PMID:17392463
Biological Process	GO:0035249	synaptic transmission, glutamatergic	Cdh8	IMP	MGI:MGI:3707077	Mouse	PMID:17392463

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern