Comparative GO Graph (mouse, human, rat, zebrafish)

Source

Alliance of Genome Resources

Compare experimental GO annotations for Human-Mouse-Rat-Zebrafish orthologs to Mouse Cebpe

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

This class contains
- Human genes CEBPE
- Mouse genes Cebpe
- Rat genes Cebpe
- Zfish genes cebp1
Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cebpe

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003677	DNA binding	Cebpe	IDA		Rat	PMID:1884998\|RGD:1298752
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	CEBPE	IDA		Human	PMID:10233885
Molecular Function	GO:0003700	DNA-binding transcription factor activity	cebp1	IDA		Zfish	PMID:27268086
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	cebp1	IDA		Zfish	PMID:27268086
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	cebp1	IGI	ZFIN:ZDB-GENE-991110-14	Zfish	PMID:27268086
Molecular Function	GO:0042802	identical protein binding	Cebpe	IPI	RGD:2329	Rat	PMID:1884998\|RGD:1298752
Molecular Function	GO:0005515	protein binding	CEBPE	IPI	UniProtKB:P35638	Human	PMID:20211142
Molecular Function	GO:0005515	protein binding	CEBPE	IPI	UniProtKB:P18847	Human	PMID:23661758
Molecular Function	GO:0005515	protein binding	CEBPE	IPI	UniProtKB:P18848	Human	PMID:23661758
Molecular Function	GO:0005515	protein binding	CEBPE	IPI	UniProtKB:P35638	Human	PMID:23661758
Molecular Function	GO:0005515	protein binding	CEBPE	IPI	UniProtKB:P49715	Human	PMID:23661758
Molecular Function	GO:0005515	protein binding	CEBPE	IPI	UniProtKB:P53567	Human	PMID:23661758
Molecular Function	GO:0005515	protein binding	CEBPE	IPI	UniProtKB:Q16520	Human	PMID:23661758
Molecular Function	GO:0005515	protein binding	CEBPE	IPI	UniProtKB:Q9NR55	Human	PMID:23661758
Molecular Function	GO:0005515	protein binding	CEBPE	IPI	UniProtKB:P15976,UniProtKB:P17947	Human	PMID:26019275
Molecular Function	GO:0005515	protein binding	cebp1	IPI	ZFIN:ZDB-GENE-991110-14	Zfish	PMID:27268086
Molecular Function	GO:0044877	protein-containing complex binding	Cebpe	IDA		Rat	PMID:1884998\|RGD:1298752
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	CEBPE	IDA		Human	PMID:10233885
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	cebp1	IDA		Zfish	PMID:27268086
Molecular Function	GO:0043565	sequence-specific DNA binding	cebp1	IPI	ZFIN:ZDB-GENE-020515-2	Zfish	PMID:19275935
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	CEBPE	IDA		Human	PMID:28473536
Cellular Component	GO:0005654	nucleoplasm	CEBPE	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	CEBPE	IDA		Human	PMID:11313242
Cellular Component	GO:0005886	plasma membrane	CEBPE	IDA		Human	GO_REF:0000052
Cellular Component	GO:0090575	RNA polymerase II transcription regulator complex	CEBPE	IPI		Human	PMID:23661758
Cellular Component	GO:0090575	RNA polymerase II transcription regulator complex	CEBPE	IPI		Human	PMID:28186491
Biological Process	GO:0071222	cellular response to lipopolysaccharide	Cebpe	IEP		Rat	PMID:9593684\|RGD:728287
Biological Process	GO:0006351	DNA-templated transcription	cebp1	IDA		Zfish	PMID:27268086\|ZFIN:ZDB-PUB-160610-16
Biological Process	GO:0030851	granulocyte differentiation	CEBPE	IMP		Human	PMID:10359588
Biological Process	GO:0030225	macrophage differentiation	Cebpe	IMP	MGI:MGI:2178607	Mouse	PMID:11861297
Biological Process	GO:0030099	myeloid cell differentiation	Cebpe	IEP		Rat	PMID:9593684\|RGD:728287
Biological Process	GO:0030099	myeloid cell differentiation	cebp1	IMP	ZFIN:ZDB-MRPHLNO-100430-3	Zfish	PMID:19275935
Biological Process	GO:0030099	myeloid cell differentiation	cebp1	IMP	ZFIN:ZDB-MRPHLNO-100430-4	Zfish	PMID:19275935
Biological Process	GO:0006909	phagocytosis	Cebpe	IMP	MGI:MGI:2178607	Mouse	PMID:11861297
Biological Process	GO:0006909	phagocytosis	Cebpe	IMP	MGI:MGI:2178607	Mouse	PMID:10216107
Biological Process	GO:0010628	positive regulation of gene expression	Cebpe	IDA		Mouse	PMID:15064728
Biological Process	GO:0010628	positive regulation of gene expression	cebp1	IGI	ZFIN:ZDB-GENE-000605-1,ZFIN:ZDB-GENE-980526-164	Zfish	PMID:19275935
Biological Process	GO:0010628	positive regulation of gene expression	cebp1	IMP	ZFIN:ZDB-MRPHLNO-100430-3	Zfish	PMID:19275935
Biological Process	GO:0010628	positive regulation of gene expression	cebp1	IGI	ZFIN:ZDB-GENE-980526-164	Zfish	PMID:19275935
Biological Process	GO:0010628	positive regulation of gene expression	cebp1	IMP	ZFIN:ZDB-MRPHLNO-100430-4	Zfish	PMID:19275935
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	CEBPE	IDA		Human	PMID:10233885
Biological Process	GO:0045658	regulation of neutrophil differentiation	cebp1	IMP	ZFIN:ZDB-GENO-161202-4	Zfish	PMID:27268086
Biological Process	GO:0045658	regulation of neutrophil differentiation	cebp1	IGI	ZFIN:ZDB-GENE-991110-14	Zfish	PMID:27268086
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	cebp1	IDA		Zfish	PMID:27268086\|ZFIN:ZDB-PUB-160610-16

Gene Ontology Evidence Code Abbreviations:

EXP Inferred from experiment

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

HTP Inferred from High Throughput Experiment

HDA Inferred from High Throughput Direct Assay

HMP Inferred from High Throughput Mutant Phenotype

HGI Inferred from High Throughput Genetic Interaction

HEP Inferred from High Throughput Expression Pattern

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 07/02/2024 MGI 6.13

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023. Complete table of the annotations represented in this image is provided below.

Molecular Function

Cellular Component

Biological Process

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.