Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CELF1
  • Mouse genes Celf1
  • Rat genes Celf1
  • Zfish genes celf1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Celf1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042835	BRE binding	CELF1	IDA		Human	PMID:10893231
Molecular Function	GO:0106222	lncRNA binding	Celf1	IPI	MGI:MGI:3045386	Mouse	PMID:28763438
Molecular Function	GO:0003730	mRNA 3'-UTR binding	CELF1	IDA		Human	PMID:30508596
Molecular Function	GO:0003730	mRNA 3'-UTR binding	Celf1	IDA		Rat	PMID:30508596|RGD:38501076
Molecular Function	GO:0003730	mRNA 3'-UTR binding	celf1	IDA		Zfish	PMID:31227602
Molecular Function	GO:0003730	mRNA 3'-UTR binding	celf1	IPI	ZFIN:ZDB-GENE-990621-7	Zfish	PMID:22899848
Molecular Function	GO:0003729	mRNA binding	CELF1	IDA		Human	PMID:14726956
Molecular Function	GO:0003729	mRNA binding	Celf1	IPI	MGI:MGI:1342774	Mouse	PMID:28763438
Molecular Function	GO:0003729	mRNA binding	Celf1	IDA		Mouse	PMID:32245946
Molecular Function	GO:0003729	mRNA binding	celf1	IPI	ZFIN:ZDB-GENE-031117-1	Zfish	PMID:22899848
Molecular Function	GO:0003729	mRNA binding	celf1	IPI	ZFIN:ZDB-GENE-070319-1	Zfish	PMID:22899848
Molecular Function	GO:0003729	mRNA binding	celf1	IPI	ZFIN:ZDB-GENE-980526-561	Zfish	PMID:22899848
Molecular Function	GO:0003729	mRNA binding	celf1	IPI	ZFIN:ZDB-GENE-990621-7	Zfish	PMID:22899848
Molecular Function	GO:0003729	mRNA binding	celf1	IDA		Zfish	PMID:24005864
Molecular Function	GO:0036002	pre-mRNA binding	CELF1	IDA		Human	PMID:11158314
Molecular Function	GO:0005515	protein binding	CELF1	IPI	UniProtKB:P31943	Human	PMID:16946708
Molecular Function	GO:0005515	protein binding	CELF1	IPI	UniProtKB:P31483	Human	PMID:18164289
Molecular Function	GO:0003723	RNA binding	CELF1	IDA		Human	PMID:16946708
Molecular Function	GO:0003723	RNA binding	CELF1	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	CELF1	HDA		Human	PMID:22681889
Molecular Function	GO:0031369	translation initiation factor binding	Celf1	IDA		Mouse	PMID:16931514
Cellular Component	GO:0005737	cytoplasm	Celf1	IDA		Mouse	MGI:MGI:6479802|PMID:28350193
Cellular Component	GO:0005737	cytoplasm	Celf1	IDA		Mouse	PMID:17130239
Cellular Component	GO:0005737	cytoplasm	Celf1	IDA		Mouse	PMID:19075228
Cellular Component	GO:0005737	cytoplasm	Celf1	IDA		Rat	PMID:21737690|RGD:151893503
Cellular Component	GO:0005737	cytoplasm	celf1	IDA		Zfish	PMID:16168720
Cellular Component	GO:0010494	cytoplasmic stress granule	CELF1	IDA		Human	PMID:18164289
Cellular Component	GO:0001673	male germ cell nucleus	Celf1	IDA		Mouse	PMID:17130239
Cellular Component	GO:0016020	membrane	CELF1	HDA		Human	PMID:19946888
Cellular Component	GO:0005654	nucleoplasm	CELF1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	CELF1	IDA		Human	PMID:11158314
Cellular Component	GO:0005634	nucleus	CELF1	IDA		Human	PMID:26366374
Cellular Component	GO:0005634	nucleus	Celf1	IDA		Mouse	MGI:MGI:6479802|PMID:28350193
Cellular Component	GO:0005634	nucleus	Celf1	IDA		Mouse	PMID:19075228
Cellular Component	GO:0005634	nucleus	Celf1	IDA		Mouse	PMID:15830352
Cellular Component	GO:0005634	nucleus	Celf1	IDA		Rat	PMID:21737690|RGD:151893503
Cellular Component	GO:0097356	perinucleolar compartment	CELF1	IDA		Human	PMID:18164289
Cellular Component	GO:0045495	pole plasm	celf1	IDA		Zfish	PMID:16168720
Biological Process	GO:0016477	cell migration	celf1	IMP		Zfish	PMID:24005864|ZFIN:ZDB-PUB-130906-3
Biological Process	GO:1904584	cellular response to polyamine macromolecule	Celf1	IEP		Rat	PMID:21737690|RGD:151893503
Biological Process	GO:0021987	cerebral cortex development	Celf1	IMP		Mouse	PMID:32245946
Biological Process	GO:0007368	determination of left/right symmetry	celf1	IMP	ZFIN:ZDB-MRPHLNO-121102-2,ZFIN:ZDB-MRPHLNO-121102-3	Zfish	PMID:22899848
Biological Process	GO:0048588	developmental cell growth	celf1	IMP		Zfish	PMID:24005864|ZFIN:ZDB-PUB-130906-3
Biological Process	GO:0048565	digestive tract development	celf1	IMP	ZFIN:ZDB-MRPHLNO-121102-2,ZFIN:ZDB-MRPHLNO-121102-3	Zfish	PMID:24005864
Biological Process	GO:1990402	embryonic liver development	celf1	IMP	ZFIN:ZDB-MRPHLNO-121102-2,ZFIN:ZDB-MRPHLNO-121102-3	Zfish	PMID:24005864
Biological Process	GO:0061031	endodermal digestive tract morphogenesis	celf1	IMP	ZFIN:ZDB-MRPHLNO-121102-2,ZFIN:ZDB-MRPHLNO-121102-3	Zfish	PMID:24005864
Biological Process	GO:0070306	lens fiber cell differentiation	celf1	IMP	ZFIN:ZDB-MRPHLNO-180827-1	Zfish	PMID:29565969
Biological Process	GO:0001889	liver development	celf1	IMP		Zfish	PMID:24005864|ZFIN:ZDB-PUB-130906-3
Biological Process	GO:0061157	mRNA destabilization	Celf1	IDA		Rat	PMID:30508596|RGD:38501076
Biological Process	GO:0006376	mRNA splice site selection	CELF1	IDA		Human	PMID:11158314
Biological Process	GO:0006376	mRNA splice site selection	Celf1	IDA		Mouse	PMID:11158314
Biological Process	GO:0008285	negative regulation of cell population proliferation	Celf1	IDA		Rat	PMID:30514107|RGD:40902969
Biological Process	GO:0050680	negative regulation of epithelial cell proliferation	Celf1	IMP		Rat	PMID:21737690|RGD:151893503
Biological Process	GO:0010629	negative regulation of gene expression	CELF1	IMP		Human	PMID:27230130
Biological Process	GO:0031016	pancreas development	celf1	IMP	ZFIN:ZDB-MRPHLNO-121102-2,ZFIN:ZDB-MRPHLNO-121102-3	Zfish	PMID:24005864
Biological Process	GO:0061113	pancreas morphogenesis	celf1	IMP		Zfish	PMID:24005864|ZFIN:ZDB-PUB-130906-3
Biological Process	GO:0010942	positive regulation of cell death	CELF1	IMP		Human	PMID:26366374
Biological Process	GO:0010628	positive regulation of gene expression	CELF1	IMP		Human	PMID:26366374
Biological Process	GO:0010628	positive regulation of gene expression	Celf1	IDA		Rat	PMID:30514107|RGD:40902969
Biological Process	GO:0061014	positive regulation of mRNA catabolic process	celf1	IMP		Zfish	PMID:22899848
Biological Process	GO:0061014	positive regulation of mRNA catabolic process	celf1	IMP	ZFIN:ZDB-MRPHLNO-121102-2,ZFIN:ZDB-MRPHLNO-121102-3	Zfish	PMID:22899848
Biological Process	GO:0040018	positive regulation of multicellular organism growth	Celf1	IMP	MGI:MGI:3700209	Mouse	PMID:17130239
Biological Process	GO:0016441	post-transcriptional gene silencing	CELF1	IDA		Human	PMID:30508596
Biological Process	GO:0016441	post-transcriptional gene silencing	Celf1	IMP		Rat	PMID:30508596|RGD:38501076
Biological Process	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	Celf1	IDA		Mouse	PMID:32109384
Biological Process	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	Celf1	IMP		Mouse	PMID:32109384
Biological Process	GO:0051726	regulation of cell cycle	Celf1	IDA		Rat	PMID:30514107|RGD:40902969
Biological Process	GO:0050727	regulation of inflammatory response	CELF1	IMP		Human	PMID:27230130
Biological Process	GO:0043484	regulation of RNA splicing	CELF1	IDA		Human	PMID:16946708
Biological Process	GO:0007286	spermatid development	Celf1	IMP	MGI:MGI:3700209	Mouse	PMID:17130239

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern