Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CELF3
  • Mouse genes Celf3
  • Rat genes Celf3
  • Zfish genes celf3a,celf3b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Celf3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0097322	7SK snRNA binding	Celf3	IPI	MGI:MGI:103186	Mouse	PMID:25145264
Molecular Function	GO:0003723	RNA binding	CELF3	IMP		Human	PMID:17725984
Molecular Function	GO:0003723	RNA binding	Celf3	IPI	MGI:MGI:1919539	Mouse	PMID:25145264
Molecular Function	GO:0003723	RNA binding	Celf3	IPI	MGI:MGI:2444886	Mouse	PMID:25145264
Molecular Function	GO:0003723	RNA binding	Celf3	IPI	MGI:MGI:103186	Mouse	PMID:25145264
Cellular Component	GO:0005737	cytoplasm	CELF3	IDA		Human	PMID:17725984
Cellular Component	GO:0005737	cytoplasm	Celf3	IDA		Mouse	PMID:17393433
Cellular Component	GO:0005737	cytoplasm	Celf3	IDA		Mouse	PMID:25145264
Cellular Component	GO:0016604	nuclear body	Celf3	IDA		Mouse	PMID:25145264
Cellular Component	GO:0005634	nucleus	CELF3	IDA		Human	PMID:17725984
Cellular Component	GO:0005634	nucleus	Celf3	IDA		Mouse	PMID:17393433
Cellular Component	GO:0005634	nucleus	Celf3	IDA		Mouse	PMID:25145264
Biological Process	GO:0030317	flagellated sperm motility	Celf3	IMP	MGI:MGI:3767553	Mouse	PMID:17393433
Biological Process	GO:0098781	ncRNA transcription	Celf3	IMP		Mouse	PMID:25145264
Biological Process	GO:0030575	nuclear body organization	Celf3	IMP		Mouse	PMID:25145264
Biological Process	GO:0048026	positive regulation of mRNA splicing, via spliceosome	CELF3	IDA		Human	PMID:15009664
Biological Process	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	CELF3	IDA		Human	PMID:11158314
Biological Process	GO:0008380	RNA splicing	CELF3	IMP		Human	PMID:17725984
Biological Process	GO:0007283	spermatogenesis	Celf3	IMP	MGI:MGI:3767553	Mouse	PMID:17393433

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern