Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CHAMP1
  • Mouse genes Champ1
  • Rat genes Champ1
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Champ1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CHAMP1	IPI	UniProtKB:P45973	Human	PMID:20850016
Molecular Function	GO:0005515	protein binding	CHAMP1	IPI	UniProtKB:P83916	Human	PMID:20850016
Molecular Function	GO:0005515	protein binding	CHAMP1	IPI	UniProtKB:Q13185	Human	PMID:20850016
Molecular Function	GO:0005515	protein binding	CHAMP1	IPI	UniProtKB:Q7Z3K3	Human	PMID:20850016
Molecular Function	GO:0005515	protein binding	CHAMP1	IPI	UniProtKB:Q9UI95	Human	PMID:21063390
Molecular Function	GO:0005515	protein binding	CHAMP1	IPI	UniProtKB:Q9UI95	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	CHAMP1	IPI	UniProtKB:Q9UI95	Human	PMID:29656893
Molecular Function	GO:0005515	protein binding	CHAMP1	IPI	UniProtKB:Q9UI95	Human	PMID:29789392
Cellular Component	GO:0000793	condensed chromosome	CHAMP1	IDA		Human	PMID:21063390
Cellular Component	GO:0000776	kinetochore	CHAMP1	IDA		Human	PMID:21063390
Cellular Component	GO:0016604	nuclear body	CHAMP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	CHAMP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	CHAMP1	IDA		Human	PMID:21063390
Cellular Component	GO:0005819	spindle	CHAMP1	IDA		Human	PMID:21063390
Biological Process	GO:0051315	attachment of mitotic spindle microtubules to kinetochore	CHAMP1	IMP		Human	PMID:21063390
Biological Process	GO:0034501	protein localization to kinetochore	CHAMP1	IMP		Human	PMID:21063390
Biological Process	GO:0035372	protein localization to microtubule	CHAMP1	IMP		Human	PMID:21063390
Biological Process	GO:0031134	sister chromatid biorientation	CHAMP1	IMP		Human	PMID:21063390

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern