Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CIB2
  • Mouse genes Cib2
  • Rat genes Cib2
  • Zfish genes cib2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cib2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005509	calcium ion binding	CIB2	IDA		Human	PMID:22779914
Molecular Function	GO:0005509	calcium ion binding	Cib2	IDA		Mouse	PMID:18611855
Molecular Function	GO:0005178	integrin binding	Cib2	IPI	PR:Q61738	Mouse	PMID:18611855
Molecular Function	GO:0000287	magnesium ion binding	CIB2	IDA		Human	PMID:22779914
Molecular Function	GO:0005515	protein binding	CIB2	IPI	UniProtKB:P08514	Human	PMID:22779914
Molecular Function	GO:0005515	protein binding	CIB2	IPI	UniProtKB:Q13683	Human	PMID:22779914
Molecular Function	GO:0005515	protein binding	CIB2	IPI	UniProtKB:Q13402	Human	PMID:23023331
Molecular Function	GO:0005515	protein binding	CIB2	IPI	UniProtKB:Q9P202	Human	PMID:23023331
Molecular Function	GO:0042803	protein homodimerization activity	CIB2	IDA		Human	PMID:23023331
Molecular Function	GO:0044877	protein-containing complex binding	Cib2	IDA		Mouse	PMID:18611855
Cellular Component	GO:0072562	blood microparticle	CIB2	HDA		Human	PMID:22516433
Cellular Component	GO:0032437	cuticular plate	CIB2	IDA		Human	PMID:26426422
Cellular Component	GO:0005737	cytoplasm	Cib2	IDA		Mouse	MGI:MGI:5487486|PMID:23023331
Cellular Component	GO:0005927	muscle tendon junction	Cib2	IDA		Mouse	PMID:18611855
Cellular Component	GO:0031594	neuromuscular junction	Cib2	IDA		Mouse	PMID:18611855
Cellular Component	GO:0001917	photoreceptor inner segment	Cib2	IDA		Mouse	MGI:MGI:5487486|PMID:23023331
Cellular Component	GO:0001750	photoreceptor outer segment	Cib2	IDA		Mouse	MGI:MGI:5487486|PMID:23023331
Cellular Component	GO:0042383	sarcolemma	Cib2	IDA		Mouse	PMID:18611855
Cellular Component	GO:0032420	stereocilium	CIB2	IDA		Human	PMID:26173970
Cellular Component	GO:0032420	stereocilium	CIB2	IDA		Human	PMID:26426422
Cellular Component	GO:0032420	stereocilium	Cib2	IDA		Mouse	MGI:MGI:5487486|PMID:23023331
Biological Process	GO:0055074	calcium ion homeostasis	Cib2	IMP		Mouse	MGI:MGI:5487486|PMID:23023331
Biological Process	GO:0043010	camera-type eye development	cib2	IMP	ZFIN:ZDB-MRPHLNO-121119-2	Zfish	PMID:23023331
Biological Process	GO:0043010	camera-type eye development	cib2	IMP	ZFIN:ZDB-MRPHLNO-121119-3	Zfish	PMID:23023331
Biological Process	GO:0071318	cellular response to ATP	CIB2	IDA		Human	PMID:23023331
Biological Process	GO:0071318	cellular response to ATP	CIB2	IDA		Human	PMID:26173970
Biological Process	GO:0007638	mechanosensory behavior	cib2	IMP	ZFIN:ZDB-MRPHLNO-121119-2	Zfish	PMID:23023331
Biological Process	GO:0048884	neuromast development	cib2	IMP	ZFIN:ZDB-MRPHLNO-121119-3	Zfish	PMID:23023331
Biological Process	GO:0048884	neuromast development	cib2	IMP	ZFIN:ZDB-MRPHLNO-121119-2	Zfish	PMID:23023331
Biological Process	GO:0045494	photoreceptor cell maintenance	Cib2	IDA		Mouse	MGI:MGI:5487486|PMID:23023331
Biological Process	GO:0007204	positive regulation of cytosolic calcium ion concentration	CIB2	IDA		Human	PMID:23023331
Biological Process	GO:0007204	positive regulation of cytosolic calcium ion concentration	CIB2	IDA		Human	PMID:26173970

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern