Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CIBAR1
  • Mouse genes Cibar1
  • Rat genes Cibar1
  • Zfish genes cibar1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cibar1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005543	phospholipid binding	CIBAR1	IDA		Human	PMID:30404948
Molecular Function	GO:0005515	protein binding	CIBAR1	IPI	UniProtKB:Q9Y3M2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CIBAR1	IPI	UniProtKB:A1XBS5	Human	PMID:27528616
Molecular Function	GO:0005515	protein binding	CIBAR1	IPI	UniProtKB:Q6ZTR7	Human	PMID:27528616
Molecular Function	GO:0005515	protein binding	CIBAR1	IPI	UniProtKB:Q9Y3M2	Human	PMID:27528616
Molecular Function	GO:0005515	protein binding	Cibar1	IPI	UniProtKB:Q60680-1	Mouse	MGI:MGI:3688344|PMID:15102471
Cellular Component	GO:0005814	centriole	CIBAR1	IDA		Human	PMID:27528616
Cellular Component	GO:0036064	ciliary basal body	Cibar1	IDA		Mouse	MGI:MGI:5819324|PMID:27528616
Cellular Component	GO:0097546	ciliary base	CIBAR1	IDA		Human	PMID:27528616
Cellular Component	GO:0035869	ciliary transition zone	Cibar1	IDA		Mouse	MGI:MGI:6152361|PMID:29459677
Cellular Component	GO:0005929	cilium	Cibar1	IDA		Mouse	MGI:MGI:6152361|PMID:29459677
Cellular Component	GO:0005737	cytoplasm	CIBAR1	IDA		Human	PMID:27528616
Cellular Component	GO:0005737	cytoplasm	CIBAR1	IDA		Human	PMID:30404948
Cellular Component	GO:0019898	extrinsic component of membrane	CIBAR1	IDA		Human	PMID:30404948
Cellular Component	GO:0030061	mitochondrial crista	CIBAR1	IMP		Human	PMID:30404948
Cellular Component	GO:0005743	mitochondrial inner membrane	CIBAR1	IDA		Human	PMID:30404948
Cellular Component	GO:0005739	mitochondrion	CIBAR1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005739	mitochondrion	Cibar1	IDA		Mouse	MGI:MGI:6810287|PMID:30404948
Cellular Component	GO:0005634	nucleus	CIBAR1	IDA		Human	PMID:30404948
Biological Process	GO:0060271	cilium assembly	CIBAR1	IMP		Human	PMID:27528616
Biological Process	GO:0060271	cilium assembly	Cibar1	IMP		Mouse	MGI:MGI:6152361|PMID:29459677
Biological Process	GO:0007007	inner mitochondrial membrane organization	CIBAR1	IMP		Human	PMID:30404948
Biological Process	GO:0035108	limb morphogenesis	CIBAR1	IMP		Human	PMID:30395363
Biological Process	GO:0035108	limb morphogenesis	Cibar1	IMP		Mouse	MGI:MGI:6304712|PMID:30395363
Biological Process	GO:0061024	membrane organization	CIBAR1	IDA		Human	PMID:30404948
Biological Process	GO:0097749	membrane tubulation	CIBAR1	IMP		Human	PMID:30404948
Biological Process	GO:0045880	positive regulation of smoothened signaling pathway	Cibar1	IMP		Mouse	MGI:MGI:6152361|PMID:29459677

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern