Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CILP
  • Mouse genes Cilp
  • Rat genes Cilp
  • Zfish genes cilp
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cilp

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0062023	collagen-containing extracellular matrix	CILP	HDA		Human	PMID:27068509
Cellular Component	GO:0062023	collagen-containing extracellular matrix	CILP	HDA		Human	PMID:27559042
Cellular Component	GO:0062023	collagen-containing extracellular matrix	CILP	IDA		Human	PMID:9722583
Cellular Component	GO:0070062	extracellular exosome	CILP	HDA		Human	PMID:23533145
Cellular Component	GO:0005615	extracellular space	CILP	IDA		Human	PMID:12746903
Cellular Component	GO:0005615	extracellular space	CILP	IDA		Human	PMID:9722584
Biological Process	GO:0010629	negative regulation of gene expression	CILP	IDA		Human	PMID:29167509
Biological Process	GO:0043569	negative regulation of insulin-like growth factor receptor signaling pathway	CILP	IDA		Human	PMID:12746903
Biological Process	GO:0060392	negative regulation of SMAD protein signal transduction	CILP	IGI	UniProtKB:P01137	Human	PMID:29167509
Biological Process	GO:0030512	negative regulation of transforming growth factor beta receptor signaling pathway	CILP	IDA		Human	PMID:29167509

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern