Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CIPC
  • Mouse genes Cipc
  • Rat genes Cipc
  • Zfish genes cipca,cipcb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cipc

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CIPC	IPI	UniProtKB:Q9UJ41	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CIPC	IPI	UniProtKB:O43639	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Cipc	IPI	UniProtKB:O08785	Mouse	MGI:MGI:5532917|PMID:17310242
Cellular Component	GO:0005829	cytosol	CIPC	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	CIPC	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	CIPC	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Cipc	IDA		Mouse	MGI:MGI:5532917|PMID:17310242
Biological Process	GO:0042754	negative regulation of circadian rhythm	Cipc	IMP		Mouse	MGI:MGI:5532917|PMID:17310242
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	Cipc	IDA		Mouse	MGI:MGI:5532917|PMID:17310242

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern