Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CLCC1
  • Mouse genes Clcc1
  • Rat genes Clcc1
  • Zfish genes clcc1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Clcc1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005254	chloride channel activity	Clcc1	IDA		Rat	PMID:11279057|RGD:1299391
Molecular Function	GO:0005254	chloride channel activity	Clcc1	IMP		Rat	PMID:11279057|RGD:1299391
Molecular Function	GO:0005515	protein binding	CLCC1	IPI	UniProtKB:A0A0B4J2F0	Human	PMID:31653868
Cellular Component	GO:0005737	cytoplasm	Clcc1	IDA		Rat	PMID:11279057|RGD:1299391
Cellular Component	GO:0005783	endoplasmic reticulum	CLCC1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005783	endoplasmic reticulum	Clcc1	IDA		Rat	PMID:11279057|RGD:1299391
Cellular Component	GO:0005783	endoplasmic reticulum	Clcc1	IMP		Rat	PMID:11279057|RGD:1299391
Cellular Component	GO:0005794	Golgi apparatus	Clcc1	IDA		Rat	PMID:11279057|RGD:1299391
Cellular Component	GO:0005794	Golgi apparatus	Clcc1	IMP		Rat	PMID:11279057|RGD:1299391
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	CLCC1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016020	membrane	CLCC1	HDA		Human	PMID:19946888
Cellular Component	GO:0044233	mitochondria-associated endoplasmic reticulum membrane	CLCC1	IDA		Human	PMID:31653868
Cellular Component	GO:0005634	nucleus	Clcc1	IDA		Rat	PMID:11279057|RGD:1299391
Biological Process	GO:0006821	chloride transport	Clcc1	IDA		Rat	PMID:11279057|RGD:1299391
Biological Process	GO:0060041	retina development in camera-type eye	clcc1	IMP	ZFIN:ZDB-MRPHLNO-190312-1	Zfish	PMID:30157172
Biological Process	GO:0060041	retina development in camera-type eye	clcc1	IMP	ZFIN:ZDB-GENO-190318-1	Zfish	PMID:30157172

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern