Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CLGN
  • Mouse genes Clgn
  • Rat genes Clgn
  • Zfish genes clgn
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Clgn

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Clgn	IPI	PR:Q9DBX2	Mouse	PMID:22357757
Molecular Function	GO:0044183	protein folding chaperone	Clgn	IMP		Mouse	PMID:22357757
Cellular Component	GO:0005783	endoplasmic reticulum	CLGN	IDA		Human	GO_REF:0000052
Biological Process	GO:0007339	binding of sperm to zona pellucida	Clgn	IMP	MGI:MGI:2156041	Mouse	PMID:11784061
Biological Process	GO:0007339	binding of sperm to zona pellucida	Clgn	IMP	MGI:MGI:2156041	Mouse	PMID:9177349
Biological Process	GO:0065003	protein-containing complex assembly	Clgn	IMP	MGI:MGI:2156041	Mouse	PMID:11784061
Biological Process	GO:0007338	single fertilization	Clgn	IGI	MGI:MGI:1922177	Mouse	PMID:22621904
Biological Process	GO:0007338	single fertilization	Clgn	IGI	MGI:MGI:102518	Mouse	PMID:22621904

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern