Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CLIP3
  • Mouse genes Clip3
  • Rat genes Clip3
  • Zfish genes clip3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Clip3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0035594	ganglioside binding	CLIP3	IDA		Human	PMID:20052288
Molecular Function	GO:0008017	microtubule binding	CLIP3	IDA		Human	PMID:15262990
Molecular Function	GO:0008017	microtubule binding	CLIP3	IMP		Human	PMID:20052288
Molecular Function	GO:0005515	protein binding	CLIP3	IPI	UniProtKB:Q80TN5	Human	PMID:26198635
Molecular Function	GO:0005515	protein binding	CLIP3	IPI	UniProtKB:Q9CWU2	Human	PMID:26198635
Molecular Function	GO:0005515	protein binding	CLIP3	IPI	UniProtKB:Q08117-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLIP3	IPI	UniProtKB:Q08379	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLIP3	IPI	UniProtKB:Q9Y592-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLIP3	IPI	UniProtKB:O60333-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	CLIP3	IPI	UniProtKB:O76024	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	CLIP3	IPI	UniProtKB:P04792	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	CLIP3	IPI	UniProtKB:P28799	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	CLIP3	IPI	UniProtKB:Q9Y3C5	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Clip3	IPI	UniProtKB:P31750|UniProtKB:Q60823	Mouse	MGI:MGI:3836212|PMID:19139280
Cellular Component	GO:0031901	early endosome membrane	CLIP3	IDA		Human	PMID:11854307
Cellular Component	GO:0045121	membrane raft	CLIP3	IDA		Human	PMID:15262990
Cellular Component	GO:0005886	plasma membrane	CLIP3	IMP		Human	PMID:15262990
Cellular Component	GO:0005886	plasma membrane	CLIP3	IDA		Human	PMID:19139280
Cellular Component	GO:0005886	plasma membrane	Clip3	IDA		Mouse	MGI:MGI:3836212|PMID:19139280
Cellular Component	GO:0055038	recycling endosome membrane	CLIP3	IDA		Human	PMID:11854307
Cellular Component	GO:0005802	trans-Golgi network	Clip3	IDA		Mouse	MGI:MGI:3836212|PMID:19139280
Cellular Component	GO:0032588	trans-Golgi network membrane	CLIP3	IDA		Human	PMID:11854307
Cellular Component	GO:0032588	trans-Golgi network membrane	CLIP3	IMP		Human	PMID:15262990
Biological Process	GO:0045444	fat cell differentiation	Clip3	IEP		Mouse	MGI:MGI:3836212|PMID:19139280
Biological Process	GO:0044091	membrane biogenesis	CLIP3	IMP		Human	PMID:11854307
Biological Process	GO:0031115	negative regulation of microtubule polymerization	CLIP3	IMP		Human	PMID:15262990
Biological Process	GO:0018230	peptidyl-L-cysteine S-palmitoylation	CLIP3	IMP		Human	PMID:15262990
Biological Process	GO:0043065	positive regulation of apoptotic process	CLIP3	IMP		Human	PMID:20052288
Biological Process	GO:0045807	positive regulation of endocytosis	CLIP3	IMP		Human	PMID:11854307
Biological Process	GO:0010828	positive regulation of glucose transmembrane transport	Clip3	IMP		Mouse	MGI:MGI:3836212|PMID:19139280
Biological Process	GO:1903078	positive regulation of protein localization to plasma membrane	Clip3	IDA		Mouse	MGI:MGI:3836212|PMID:19139280
Biological Process	GO:0001934	positive regulation of protein phosphorylation	Clip3	IDA		Mouse	MGI:MGI:3836212|PMID:19139280
Biological Process	GO:0098840	protein transport along microtubule	CLIP3	IMP		Human	PMID:20052288

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern