Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CLNS1A
  • Mouse genes Clns1a
  • Rat genes Clns1a
  • Zfish genes clns1a
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Clns1a

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:O14744	Human	PMID:11756452
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:P14678	Human	PMID:16087681
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:Q8BUV6	Human	PMID:16087681
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:Q969L4	Human	PMID:16087681
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:O14744	Human	PMID:18984161
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:P14678	Human	PMID:18984161
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:P62306	Human	PMID:18984161
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:P62308	Human	PMID:18984161
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:P62314	Human	PMID:18984161
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:P62316	Human	PMID:18984161
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:P62318	Human	PMID:18984161
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:Q9BRS2	Human	PMID:21081503
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:P62318	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:O14744	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:P14678	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:P62306	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:P62310	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:P62312	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:P62314	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:P62316	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:P62318	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:Q9Y333	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:P11171-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:P62308	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:P62310	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:P62312	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:P62314	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:P62316	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:Q9Y333	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:P62306	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:P62312	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:P14678-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:P62308	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:P62310	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:P62312	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:P62314	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:P62316	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:P62318	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:Q6ZUT3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLNS1A	IPI	UniProtKB:Q9Y333	Human	PMID:32296183
Molecular Function	GO:0003723	RNA binding	CLNS1A	HDA		Human	PMID:22658674
Cellular Component	GO:0005829	cytosol	CLNS1A	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	CLNS1A	IDA		Human	PMID:18984161
Cellular Component	GO:0005829	cytosol	CLNS1A	IDA		Human	PMID:21081503
Cellular Component	GO:0005829	cytosol	Clns1a	IDA		Rat	PMID:8313467|RGD:61553
Cellular Component	GO:0034709	methylosome	CLNS1A	IDA		Human	PMID:11756452
Cellular Component	GO:0034709	methylosome	CLNS1A	IDA		Human	PMID:18984161
Cellular Component	GO:0005654	nucleoplasm	CLNS1A	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	CLNS1A	IDA		Human	PMID:21081503
Cellular Component	GO:0034715	pICln-Sm protein complex	CLNS1A	IDA		Human	PMID:18984161
Biological Process	GO:0048675	axon extension	clns1a	IMP	ZFIN:ZDB-MRPHLNO-051026-1	Zfish	PMID:16204184
Biological Process	GO:0006884	cell volume homeostasis	Clns1a	IMP		Rat	PMID:8313467|RGD:61553
Biological Process	GO:0006821	chloride transport	Clns1a	IDA		Rat	PMID:8313467|RGD:61553
Biological Process	GO:0045794	negative regulation of cell volume	Clns1a	IGI	UniProtKB:Q61410	Mouse	MGI:MGI:5882897|PMID:15905169
Biological Process	GO:0000387	spliceosomal snRNP assembly	CLNS1A	IDA		Human	PMID:18984161

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern