Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CLUAP1
  • Mouse genes Cluap1
  • Rat genes Cluap1
  • Zfish genes cluap1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cluap1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CLUAP1	IPI	UniProtKB:P43364	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	CLUAP1	IPI	UniProtKB:Q9BW66	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	CLUAP1	IPI	UniProtKB:P15173	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CLUAP1	IPI	UniProtKB:P43364-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CLUAP1	IPI	UniProtKB:Q96LJ8	Human	PMID:26389662
Molecular Function	GO:0005515	protein binding	CLUAP1	IPI	UniProtKB:P15173	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	CLUAP1	IPI	UniProtKB:Q9BW66	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	CLUAP1	IPI	UniProtKB:P15173	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLUAP1	IPI	UniProtKB:P43364	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CLUAP1	IPI	UniProtKB:Q9BW66	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Cluap1	IPI	UniProtKB:Q8R3P7	Mouse	PMID:26980730
Cellular Component	GO:0005813	centrosome	Cluap1	IDA		Mouse	PMID:19253336
Cellular Component	GO:0097546	ciliary base	Cluap1	IDA		Mouse	PMID:23742838
Cellular Component	GO:0097542	ciliary tip	Cluap1	IDA		Mouse	PMID:23742838
Cellular Component	GO:0005929	cilium	Cluap1	IDA		Mouse	PMID:19253336
Cellular Component	GO:0005929	cilium	Cluap1	IDA		Mouse	PMID:23351563
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	CLUAP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0030991	intraciliary transport particle A	Cluap1	IDA		Mouse	PMID:26980730
Cellular Component	GO:0030992	intraciliary transport particle B	CLUAP1	IPI		Human	PMID:26980730
Cellular Component	GO:0030992	intraciliary transport particle B	Cluap1	IDA		Mouse	PMID:19253336
Cellular Component	GO:0005654	nucleoplasm	CLUAP1	IDA		Human	GO_REF:0000052
Biological Process	GO:0035082	axoneme assembly	Cluap1	IMP	MGI:MGI:5523142	Mouse	PMID:23742838
Biological Process	GO:0060271	cilium assembly	Cluap1	IMP	MGI:MGI:4363468	Mouse	PMID:23351563
Biological Process	GO:0060271	cilium assembly	cluap1	IMP	ZFIN:ZDB-GENO-140130-31	Zfish	PMID:24970261
Biological Process	GO:0060271	cilium assembly	cluap1	IMP	ZFIN:ZDB-GENO-111219-3	Zfish	PMID:22102889
Biological Process	GO:0060271	cilium assembly	cluap1	IGI	ZFIN:ZDB-MRPHLNO-090428-8,ZFIN:ZDB-MRPHLNO-111219-1	Zfish	PMID:22102889
Biological Process	GO:0060271	cilium assembly	cluap1	IGI	ZFIN:ZDB-MRPHLNO-111219-1,ZFIN:ZDB-MRPHLNO-111219-2	Zfish	PMID:22102889
Biological Process	GO:0021508	floor plate formation	Cluap1	IMP	MGI:MGI:4363468	Mouse	PMID:23351563
Biological Process	GO:0001947	heart looping	Cluap1	IMP	MGI:MGI:5523142	Mouse	PMID:23742838
Biological Process	GO:0001822	kidney development	cluap1	IMP	ZFIN:ZDB-MRPHLNO-111219-1	Zfish	PMID:22102889
Biological Process	GO:0001822	kidney development	cluap1	IMP	ZFIN:ZDB-GENO-111219-3	Zfish	PMID:22102889
Biological Process	GO:0001822	kidney development	cluap1	IGI	ZFIN:ZDB-MRPHLNO-111219-1,ZFIN:ZDB-MRPHLNO-111219-2	Zfish	PMID:22102889
Biological Process	GO:0060972	left/right pattern formation	Cluap1	IMP	MGI:MGI:5523142	Mouse	PMID:23742838
Biological Process	GO:0001843	neural tube closure	Cluap1	IMP	MGI:MGI:5523142	Mouse	PMID:23742838
Biological Process	GO:0045494	photoreceptor cell maintenance	cluap1	IMP	ZFIN:ZDB-GENO-140130-31	Zfish	PMID:24970261
Biological Process	GO:0007224	smoothened signaling pathway	Cluap1	IMP	MGI:MGI:4363468	Mouse	PMID:23351563
Biological Process	GO:0007224	smoothened signaling pathway	Cluap1	IGI	MGI:MGI:105373	Mouse	PMID:23742838

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern