Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CLVS1
  • Mouse genes Clvs1
  • Rat genes Clvs1
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Clvs1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0080025	phosphatidylinositol-3,5-bisphosphate binding	CLVS1	IDA		Human	PMID:19651769
Molecular Function	GO:0005515	protein binding	CLVS1	IPI	UniProtKB:Q9NZD4	Human	PMID:32296183
Cellular Component	GO:0030136	clathrin-coated vesicle	Clvs1	IDA		Rat	PMID:19651769|RGD:8553526
Cellular Component	GO:0005768	endosome	CLVS1	IDA		Human	PMID:19651769
Cellular Component	GO:0005802	trans-Golgi network	Clvs1	IDA		Rat	PMID:19651769|RGD:8553526
Biological Process	GO:0007040	lysosome organization	Clvs1	IMP		Rat	PMID:19651769|RGD:8553526

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern