Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CMA1
  • Mouse genes Cma1
  • Rat genes Cma1
  • Zfish genes si:ch211-212d10.1,si:dkey-21e2.10,si:dkey-21e2.11,si:dkey-21e2.12,si:dkey-21e2.14,si:dkey-21e2.16,si:dkey-21e2.3,si:dkey-21e2.8,si:dkey-78l4.10,si:dkey-78l4.13,si:dkey-78l4.2,si:dkey-78l4.4,si:dkey-78l4.6,si:dkey-78l4.7
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cma1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004175	endopeptidase activity	CMA1	EXP		Human	PMID:12062105
Molecular Function	GO:0004175	endopeptidase activity	CMA1	EXP		Human	PMID:9256427
Molecular Function	GO:0042277	peptide binding	Cma1	IMP		Rat	PMID:15869764|RGD:1581745
Molecular Function	GO:0004252	serine-type endopeptidase activity	CMA1	IDA		Human	PMID:1919436
Molecular Function	GO:0004252	serine-type endopeptidase activity	Cma1	IDA		Rat	PMID:12444981|RGD:5115549
Molecular Function	GO:0004252	serine-type endopeptidase activity	Cma1	IMP		Rat	PMID:15869764|RGD:1581745
Molecular Function	GO:0008236	serine-type peptidase activity	CMA1	EXP		Human	PMID:11502696
Molecular Function	GO:0008236	serine-type peptidase activity	CMA1	EXP		Human	PMID:2266130
Cellular Component	GO:0062023	collagen-containing extracellular matrix	CMA1	HDA		Human	PMID:20551380
Cellular Component	GO:0062023	collagen-containing extracellular matrix	CMA1	HDA		Human	PMID:27559042
Cellular Component	GO:0005737	cytoplasm	si:ch211-212d10.1	IDA		Zfish	PMID:25139857
Cellular Component	GO:0036464	cytoplasmic ribonucleoprotein granule	CMA1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	CMA1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005576	extracellular region	CMA1	HDA		Human	PMID:27068509
Cellular Component	GO:0005576	extracellular region	Cma1	IDA		Rat	PMID:15265236|RGD:5128503
Cellular Component	GO:0005622	intracellular anatomical structure	Cma1	IDA		Mouse	PMID:9360993
Cellular Component	GO:0030141	secretory granule	CMA1	IDA		Human	PMID:29529050
Biological Process	GO:0034769	basement membrane disassembly	CMA1	IDA		Human	PMID:27068509
Biological Process	GO:0071333	cellular response to glucose stimulus	Cma1	IEP		Rat	PMID:17483239|RGD:5128487
Biological Process	GO:0140447	cytokine precursor processing	CMA1	IDA		Human	PMID:1919436
Biological Process	GO:0022617	extracellular matrix disassembly	CMA1	IDA		Human	PMID:27068509
Biological Process	GO:0030901	midbrain development	Cma1	IEP		Rat	PMID:21396433|RGD:5128663
Biological Process	GO:0006518	peptide metabolic process	Cma1	IEP		Rat	PMID:15265236|RGD:5128503
Biological Process	GO:0045766	positive regulation of angiogenesis	Cma1	IMP		Rat	PMID:15723097|RGD:5128499
Biological Process	GO:0030163	protein catabolic process	Cma1	IDA		Rat	PMID:12900423|RGD:5128475
Biological Process	GO:0016485	protein processing	Cma1	IDA		Rat	PMID:15869764|RGD:1581745
Biological Process	GO:0050727	regulation of inflammatory response	CMA1	IDA		Human	PMID:1919436

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern