Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CNGA1
  • Mouse genes Cnga1
  • Rat genes Cnga1
  • Zfish genes cnga1a,cnga1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cnga1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0030553	cGMP binding	Cnga1	IDA		Rat	PMID:18048449|RGD:6902904
Molecular Function	GO:0005223	intracellular cGMP-activated cation channel activity	Cnga1	IDA		Rat	PMID:18048449|RGD:6902904
Molecular Function	GO:0005223	intracellular cGMP-activated cation channel activity	Cnga1	IDA		Rat	PMID:21809342|RGD:6902901
Molecular Function	GO:0005515	protein binding	CNGA1	IPI	UniProtKB:Q5ICW4	Human	PMID:20890309
Molecular Function	GO:0005515	protein binding	CNGA1	IPI	UniProtKB:Q9JLM9	Human	PMID:20890309
Cellular Component	GO:0005737	cytoplasm	Cnga1	IDA		Rat	PMID:15713832|RGD:1599621
Cellular Component	GO:0017071	intracellular cyclic nucleotide activated cation channel complex	Cnga1	IDA		Rat	PMID:12432397|RGD:632402
Cellular Component	GO:0017071	intracellular cyclic nucleotide activated cation channel complex	Cnga1	IDA		Rat	PMID:21809342|RGD:6902901
Cellular Component	GO:0016020	membrane	Cnga1	IDA		Mouse	PMID:15634774
Cellular Component	GO:0001750	photoreceptor outer segment	Cnga1	IDA		Mouse	PMID:10725384
Cellular Component	GO:0001750	photoreceptor outer segment	Cnga1	IDA		Mouse	PMID:20592197
Cellular Component	GO:0001750	photoreceptor outer segment	Cnga1	IDA		Mouse	PMID:15634774
Cellular Component	GO:0042622	photoreceptor outer segment membrane	Cnga1	IDA		Mouse	MGI:MGI:3814988|PMID:18654668
Cellular Component	GO:0043195	terminal bouton	Cnga1	IDA		Rat	PMID:21809342|RGD:6902901
Biological Process	GO:0051899	membrane depolarization	Cnga1	IDA		Rat	PMID:18048449|RGD:6902904
Biological Process	GO:0051480	regulation of cytosolic calcium ion concentration	Cnga1	IDA		Rat	PMID:21809342|RGD:6902901
Biological Process	GO:0007283	spermatogenesis	Cnga1	IEP		Rat	PMID:15713832|RGD:1599621

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern