Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CNTN6
  • Mouse genes Cntn6
  • Rat genes Cntn6
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cntn6

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Cntn6	IPI	UniProtKB:P70232	Mouse	MGI:MGI:3771533|PMID:18046458
Molecular Function	GO:0005515	protein binding	Cntn6	IPI	PR:Q8K1D8	Mouse	PMID:25074942
Cellular Component	GO:0098688	parallel fiber to Purkinje cell synapse	Cntn6	IDA		Mouse	PMID:19672956
Cellular Component	GO:0098688	parallel fiber to Purkinje cell synapse	Cntn6	IEP		Mouse	PMID:19672956
Cellular Component	GO:0005886	plasma membrane	Cntn6	IDA		Mouse	PMID:25074942
Cellular Component	GO:0098793	presynapse	Cntn6	IDA		Mouse	PMID:19672956
Cellular Component	GO:0098793	presynapse	Cntn6	IEP		Mouse	PMID:19672956
Cellular Component	GO:0042734	presynaptic membrane	Cntn6	IDA		Mouse	PMID:19672956
Cellular Component	GO:0042734	presynaptic membrane	Cntn6	IEP		Mouse	PMID:19672956
Biological Process	GO:0045747	positive regulation of Notch signaling pathway	Cntn6	IEP		Mouse	PMID:25074942

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern