Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes COG2
  • Mouse genes Cog2
  • Rat genes Cog2
  • Zfish genes cog2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cog2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	COG2	IPI	UniProtKB:Q9H9E3	Human	PMID:15047703
Molecular Function	GO:0005515	protein binding	COG2	IPI	UniProtKB:Q5JR59-3	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	COG2	IPI	UniProtKB:Q5JR59-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COG2	IPI	UniProtKB:Q76N32-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COG2	IPI	UniProtKB:Q96PV6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COG2	IPI	UniProtKB:Q9Y250	Human	PMID:32296183
Molecular Function	GO:0044877	protein-containing complex binding	Cog2	IDA		Rat	PMID:11980916|RGD:2313611
Cellular Component	GO:0005829	cytosol	Cog2	IDA		Rat	PMID:11980916|RGD:2313611
Cellular Component	GO:0005795	Golgi stack	COG2	IDA		Human	PMID:7962052
Cellular Component	GO:0017119	Golgi transport complex	COG2	IDA		Human	PMID:15047703
Cellular Component	GO:0017119	Golgi transport complex	COG2	IMP		Human	PMID:7962052
Cellular Component	GO:0017119	Golgi transport complex	Cog2	IDA		Rat	PMID:11929878|RGD:2313612
Biological Process	GO:0070085	glycosylation	COG2	IMP		Human	PMID:27066481
Biological Process	GO:0007030	Golgi organization	COG2	IMP		Human	PMID:27066481
Biological Process	GO:0007030	Golgi organization	COG2	IMP		Human	PMID:7962052
Biological Process	GO:0006891	intra-Golgi vesicle-mediated transport	COG2	IMP		Human	PMID:7962052
Biological Process	GO:0000301	retrograde transport, vesicle recycling within Golgi	COG2	IMP		Human	PMID:27066481

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern