Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes COG3
  • Mouse genes Cog3
  • Rat genes Cog3
  • Zfish genes cog3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cog3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	COG3	IPI	UniProtKB:Q62991	Human	PMID:19536132
Molecular Function	GO:0005515	protein binding	COG3	IPI	UniProtKB:Q12893	Human	PMID:24806965
Cellular Component	GO:0005829	cytosol	COG3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005794	Golgi apparatus	COG3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005794	Golgi apparatus	COG3	IDA		Human	PMID:11980916
Cellular Component	GO:0017119	Golgi transport complex	COG3	IDA		Human	PMID:11292827
Cellular Component	GO:0017119	Golgi transport complex	COG3	IDA		Human	PMID:15047703
Cellular Component	GO:0005886	plasma membrane	COG3	IDA		Human	GO_REF:0000052
Biological Process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	COG3	IDA		Human	PMID:11929878
Biological Process	GO:0070085	glycosylation	COG3	IMP		Human	PMID:27066481
Biological Process	GO:0007030	Golgi organization	COG3	IGI	UniProtKB:Q9H082	Human	PMID:20163571
Biological Process	GO:0007030	Golgi organization	COG3	IMP		Human	PMID:20163571
Biological Process	GO:0007030	Golgi organization	COG3	IMP		Human	PMID:27066481
Biological Process	GO:0006891	intra-Golgi vesicle-mediated transport	COG3	IDA		Human	PMID:11929878
Biological Process	GO:0006486	protein glycosylation	COG3	IMP		Human	PMID:16420527
Biological Process	GO:0033365	protein localization to organelle	COG3	IMP		Human	PMID:16420527
Biological Process	GO:0050821	protein stabilization	COG3	IMP		Human	PMID:16420527
Biological Process	GO:0000301	retrograde transport, vesicle recycling within Golgi	COG3	IMP		Human	PMID:27066481
Biological Process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	COG3	IMP		Human	PMID:16420527

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern