Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes COG4
  • Mouse genes Cog4
  • Rat genes Cog4
  • Zfish genes cog4
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cog4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	COG4	IPI	UniProtKB:P83436	Human	PMID:15047703
Molecular Function	GO:0005515	protein binding	COG4	IPI	UniProtKB:Q14746	Human	PMID:15047703
Molecular Function	GO:0005515	protein binding	COG4	IPI	UniProtKB:Q8WTW3	Human	PMID:15047703
Molecular Function	GO:0005515	protein binding	COG4	IPI	UniProtKB:Q9UP83	Human	PMID:15047703
Molecular Function	GO:0005515	protein binding	COG4	IPI	UniProtKB:P83436	Human	PMID:19536132
Molecular Function	GO:0005515	protein binding	COG4	IPI	UniProtKB:Q13190	Human	PMID:19536132
Molecular Function	GO:0005515	protein binding	COG4	IPI	UniProtKB:Q62991	Human	PMID:19536132
Molecular Function	GO:0005515	protein binding	COG4	IPI	UniProtKB:Q8WVM8	Human	PMID:19536132
Molecular Function	GO:0005515	protein binding	COG4	IPI	UniProtKB:O14530	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COG4	IPI	UniProtKB:O60504	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COG4	IPI	UniProtKB:P25786	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COG4	IPI	UniProtKB:Q9BQ89	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COG4	IPI	UniProtKB:Q9BXY8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COG4	IPI	UniProtKB:Q9UI47-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COG4	IPI	UniProtKB:Q9Y285	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COG4	IPI	UniProtKB:X5D778	Human	PMID:32296183
Cellular Component	GO:0017119	Golgi transport complex	COG4	IDA		Human	PMID:15047703
Biological Process	GO:0070085	glycosylation	COG4	IMP		Human	PMID:27066481
Biological Process	GO:0007030	Golgi organization	COG4	IMP		Human	PMID:19536132
Biological Process	GO:0007030	Golgi organization	COG4	IMP		Human	PMID:27066481
Biological Process	GO:0048213	Golgi vesicle prefusion complex stabilization	COG4	IMP		Human	PMID:19536132
Biological Process	GO:0006029	proteoglycan metabolic process	cog4	IMP	ZFIN:ZDB-GENO-191003-2	Zfish	PMID:30290151
Biological Process	GO:0006029	proteoglycan metabolic process	cog4	IMP	ZFIN:ZDB-GENO-200206-5	Zfish	PMID:30290151
Biological Process	GO:0000301	retrograde transport, vesicle recycling within Golgi	COG4	IMP		Human	PMID:27066481
Biological Process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	COG4	IMP		Human	PMID:19536132
Biological Process	GO:0001501	skeletal system development	cog4	IMP	ZFIN:ZDB-GENO-200206-5	Zfish	PMID:30290151
Biological Process	GO:0001501	skeletal system development	cog4	IMP	ZFIN:ZDB-GENO-191003-2	Zfish	PMID:30290151

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern