Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes COL11A2
  • Mouse genes Col11a2
  • Rat genes Col11a2
  • Zfish genes col11a2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Col11a2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0030020	extracellular matrix structural constituent conferring tensile strength	COL11A2	HDA		Human	PMID:28344315
Molecular Function	GO:0005515	protein binding	COL11A2	IPI	UniProtKB:Q16832	Human	PMID:17703188
Cellular Component	GO:0005581	collagen trimer	Col11a2	IDA		Mouse	PMID:17683922
Cellular Component	GO:0062023	collagen-containing extracellular matrix	COL11A2	HDA		Human	PMID:28344315
Cellular Component	GO:0062023	collagen-containing extracellular matrix	COL11A2	HDA		Human	PMID:28675934
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Col11a2	HDA		Mouse	MGI:MGI:6201853|PMID:28071719
Biological Process	GO:0051216	cartilage development	COL11A2	IMP		Human	PMID:9188673
Biological Process	GO:0051216	cartilage development	col11a2	IMP	ZFIN:ZDB-GENO-190404-19	Zfish	PMID:30249781
Biological Process	GO:0060536	cartilage morphogenesis	col11a2	IMP	ZFIN:ZDB-MRPHLNO-100113-5	Zfish	PMID:19638309
Biological Process	GO:0002062	chondrocyte differentiation	Col11a2	IMP	MGI:MGI:2154689	Mouse	PMID:11668593
Biological Process	GO:0030199	collagen fibril organization	COL11A2	IDA		Human	PMID:9188673
Biological Process	GO:0030199	collagen fibril organization	Col11a2	IMP	MGI:MGI:2154689	Mouse	PMID:11668593
Biological Process	GO:0030199	collagen fibril organization	Col11a2	IMP	MGI:MGI:2154689	Mouse	PMID:10581026
Biological Process	GO:0001649	osteoblast differentiation	Col11a2	IEP		Rat	PMID:11780999|RGD:1342432
Biological Process	GO:0060021	roof of mouth development	COL11A2	IMP		Human	PMID:12673280
Biological Process	GO:0007605	sensory perception of sound	COL11A2	IMP		Human	PMID:10581026
Biological Process	GO:0007605	sensory perception of sound	COL11A2	IMP		Human	PMID:10677296
Biological Process	GO:0007605	sensory perception of sound	COL11A2	IMP		Human	PMID:16033917
Biological Process	GO:0007605	sensory perception of sound	COL11A2	IMP		Human	PMID:9188673
Biological Process	GO:0007605	sensory perception of sound	Col11a2	IMP	MGI:MGI:2154689	Mouse	PMID:10581026
Biological Process	GO:0007605	sensory perception of sound	Col11a2	IMP	MGI:MGI:2154689	Mouse	PMID:11668593
Biological Process	GO:0001501	skeletal system development	COL11A2	IMP		Human	PMID:10677296
Biological Process	GO:0048705	skeletal system morphogenesis	Col11a2	IMP	MGI:MGI:2154689	Mouse	PMID:11668593
Biological Process	GO:0060023	soft palate development	COL11A2	IMP		Human	PMID:10677296
Biological Process	GO:0001894	tissue homeostasis	Col11a2	IMP	MGI:MGI:2154689	Mouse	PMID:11237662

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern