Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes COL22A1
  • Mouse genes Col22a1
  • Rat genes Col22a1
  • Zfish genes col22a1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Col22a1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Col22a1	HDA		Mouse	MGI:MGI:6201853|PMID:28071719
Biological Process	GO:0048514	blood vessel morphogenesis	col22a1	IMP	ZFIN:ZDB-GENO-090827-1	Zfish	PMID:19501583
Biological Process	GO:0035143	caudal fin morphogenesis	col22a1	IMP	ZFIN:ZDB-GENO-090827-1	Zfish	PMID:19501583
Biological Process	GO:0035124	embryonic caudal fin morphogenesis	col22a1	IMP	ZFIN:ZDB-GENO-090827-1	Zfish	PMID:19501583
Biological Process	GO:0035124	embryonic caudal fin morphogenesis	col22a1	IMP	ZFIN:ZDB-MRPHLNO-090828-3	Zfish	PMID:19501583
Biological Process	GO:0031101	fin regeneration	col22a1	IMP	ZFIN:ZDB-GENO-090827-1	Zfish	PMID:19501583
Biological Process	GO:0016203	muscle attachment	col22a1	IMP	ZFIN:ZDB-MRPHLNO-140115-7	Zfish	PMID:24131632
Biological Process	GO:0016203	muscle attachment	col22a1	IGI	ZFIN:ZDB-MRPHLNO-080930-1,ZFIN:ZDB-MRPHLNO-140115-7	Zfish	PMID:24131632

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern