Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes COLEC11
  • Mouse genes Colec11
  • Rat genes Colec11
  • Zfish genes colec11
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Colec11

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005509	calcium ion binding	COLEC11	IDA		Human	PMID:25912189
Molecular Function	GO:0120153	calcium-dependent carbohydrate binding	COLEC11	IDA		Human	PMID:25912189
Molecular Function	GO:0003677	DNA binding	COLEC11	IDA		Human	PMID:20956340
Molecular Function	GO:0003677	DNA binding	COLEC11	IDA		Human	PMID:23954398
Molecular Function	GO:0042806	fucose binding	COLEC11	IDA		Human	PMID:20956340
Molecular Function	GO:0042802	identical protein binding	COLEC11	IPI	UniProtKB:Q9BWP8	Human	PMID:20956340
Molecular Function	GO:0042802	identical protein binding	COLEC11	IPI	UniProtKB:Q9BWP8	Human	PMID:24174618
Molecular Function	GO:0005537	mannose binding	COLEC11	IDA		Human	PMID:20956340
Molecular Function	GO:0005537	mannose binding	COLEC11	IDA		Human	PMID:25912189
Molecular Function	GO:0070492	oligosaccharide binding	COLEC11	IDA		Human	PMID:25912189
Molecular Function	GO:0005515	protein binding	COLEC11	IPI	UniProtKB:P48740	Human	PMID:20956340
Molecular Function	GO:0005515	protein binding	COLEC11	IPI	UniProtKB:P48740-1	Human	PMID:20956340
Molecular Function	GO:0005515	protein binding	COLEC11	IPI	UniProtKB:P48740-2	Human	PMID:20956340
Molecular Function	GO:0005515	protein binding	COLEC11	IPI	UniProtKB:O00187	Human	PMID:24174618
Molecular Function	GO:0005515	protein binding	COLEC11	IPI	UniProtKB:P48740	Human	PMID:24174618
Molecular Function	GO:0005515	protein binding	COLEC11	IPI	UniProtKB:P48740-1	Human	PMID:24174618
Molecular Function	GO:0005515	protein binding	COLEC11	IPI	UniProtKB:P48740-2	Human	PMID:24174618
Molecular Function	GO:0005515	protein binding	COLEC11	IPI	UniProtKB:Q9Y6Z7	Human	PMID:24174618
Cellular Component	GO:0005615	extracellular space	COLEC11	IDA		Human	PMID:25912189
Cellular Component	GO:0005615	extracellular space	Colec11	HDA		Mouse	MGI:MGI:5640941|PMID:24006456
Biological Process	GO:0019730	antimicrobial humoral response	COLEC11	IDA		Human	PMID:20956340
Biological Process	GO:0006956	complement activation	COLEC11	IDA		Human	PMID:23954398
Biological Process	GO:0001867	complement activation, lectin pathway	COLEC11	IDA		Human	PMID:24174618
Biological Process	GO:0001867	complement activation, lectin pathway	COLEC11	IMP		Human	PMID:25912189
Biological Process	GO:0032502	developmental process	colec11	IDA		Zfish	PMID:21258343|ZFIN:ZDB-PUB-110131-7
Biological Process	GO:0001755	neural crest cell migration	colec11	IGI	ZFIN:ZDB-MRPHLNO-110405-1,ZFIN:ZDB-MRPHLNO-110406-2,ZFIN:ZDB-MRPHLNO-110421-1,ZFIN:ZDB-MRPHLNO-110421-2	Zfish	PMID:21258343
Biological Process	GO:0001755	neural crest cell migration	colec11	IMP	ZFIN:ZDB-MRPHLNO-110405-1,ZFIN:ZDB-MRPHLNO-110406-2	Zfish	PMID:21258343
Biological Process	GO:1903028	positive regulation of opsonization	COLEC11	IDA		Human	PMID:24174618
Biological Process	GO:0006508	proteolysis	COLEC11	IDA		Human	PMID:24174618

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern