Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes COPB2
  • Mouse genes Copb2
  • Rat genes Copb2
  • Zfish genes copb2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Copb2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	COPB2	IPI	UniProtKB:P19838	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	COPB2	IPI	UniProtKB:P19838	Human	PMID:25609649
Molecular Function	GO:0005515	protein binding	COPB2	IPI	UniProtKB:P0DTC2	Human	PMID:34504087
Molecular Function	GO:0005515	protein binding	COPB2	IPI	UniProtKB:P19838	Human	PMID:35140242
Molecular Function	GO:0005515	protein binding	Copb2	IPI	UniProtKB:Q9EQC5	Rat	PMID:18556652|RGD:8554152
Molecular Function	GO:0005515	protein binding	Copb2	IPI	RGD:61925	Rat	PMID:9360998|RGD:727623
Molecular Function	GO:0005080	protein kinase C binding	Copb2	IPI	RGD:61925	Rat	PMID:9360998|RGD:727623
Cellular Component	GO:0030126	COPI vesicle coat	COPB2	IDA		Human	PMID:14729954
Cellular Component	GO:0030126	COPI vesicle coat	COPB2	IDA		Human	PMID:8335000
Cellular Component	GO:0005794	Golgi apparatus	Copb2	IDA		Mouse	PMID:20724702
Cellular Component	GO:0005794	Golgi apparatus	Copb2	IDA		Mouse	PMID:8947846
Cellular Component	GO:0005794	Golgi apparatus	Copb2	IDA		Rat	PMID:15728249|RGD:8554056
Cellular Component	GO:0000139	Golgi membrane	Copb2	IDA		Rat	PMID:9360998|RGD:727623
Biological Process	GO:0006891	intra-Golgi vesicle-mediated transport	COPB2	IDA		Human	PMID:8335000
Biological Process	GO:0030903	notochord development	copb2	IMP	ZFIN:ZDB-GENO-980202-221	Zfish	PMID:15469843
Biological Process	GO:0030903	notochord development	copb2	IMP	ZFIN:ZDB-GENO-980202-221	Zfish	PMID:9007234
Biological Process	GO:0030903	notochord development	copb2	IMP	ZFIN:ZDB-GENO-980202-1214	Zfish	PMID:9007233
Biological Process	GO:0030903	notochord development	copb2	IMP	ZFIN:ZDB-GENO-980202-1213	Zfish	PMID:9007233
Biological Process	GO:0030903	notochord development	copb2	IMP	ZFIN:ZDB-GENO-980202-882	Zfish	PMID:9007233
Biological Process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	COPB2	IMP		Human	PMID:34450031
Biological Process	GO:0061053	somite development	copb2	IMP	ZFIN:ZDB-GENO-980202-882	Zfish	PMID:9007233
Biological Process	GO:0061053	somite development	copb2	IMP	ZFIN:ZDB-GENO-980202-1214	Zfish	PMID:9007233
Biological Process	GO:0061053	somite development	copb2	IMP	ZFIN:ZDB-GENO-980202-221	Zfish	PMID:9007234
Biological Process	GO:0061053	somite development	copb2	IMP	ZFIN:ZDB-GENO-980202-1213	Zfish	PMID:9007233
Biological Process	GO:1901998	toxin transport	Copb2	IMP		Mouse	PMID:23716698

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern