Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes COPS6
  • Mouse genes Cops6
  • Rat genes Cops6
  • Zfish genes cops6
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cops6

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q9BX70	Human	PMID:16169070
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q9HC29	Human	PMID:17337451
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q9Y239	Human	PMID:17337451
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q92905	Human	PMID:18850735
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q92905	Human	PMID:19615732
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q9BT78	Human	PMID:19615732
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q9BX70	Human	PMID:19615732
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q9UNS2	Human	PMID:19615732
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q92905	Human	PMID:20399188
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q9UNS2	Human	PMID:20399188
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q92905	Human	PMID:21145461
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q9BT78	Human	PMID:21145461
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q9BX70	Human	PMID:21145461
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q9UNS2	Human	PMID:21145461
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q9Y297	Human	PMID:21145461
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:P31947	Human	PMID:21625211
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q8NHY2	Human	PMID:21625211
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q92905	Human	PMID:21625211
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q9UNS2	Human	PMID:24421388
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q92905	Human	PMID:25043011
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q9BT78	Human	PMID:25043011
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q9UNS2	Human	PMID:25043011
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q03468	Human	PMID:26030138
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:P28482	Human	PMID:26267535
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q9Y297	Human	PMID:26267535
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q8WXC6	Human	PMID:26456823
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q92905	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q9BT78	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q9BX70	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q9UNS2	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q13515	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q15911-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q6UXH8-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q8N6Y0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q92529	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COPS6	IPI	UniProtKB:Q9BT78	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Cops6	IPI	PR:O88543	Mouse	PMID:9707402
Molecular Function	GO:0005515	protein binding	Cops6	IPI	PR:O35864	Mouse	PMID:9707402
Molecular Function	GO:0005515	protein binding	Cops6	IPI	PR:Q99LD4	Mouse	PMID:9707402
Molecular Function	GO:0005515	protein binding	Cops6	IPI	PR:P61202	Mouse	PMID:9707402
Molecular Function	GO:0005515	protein binding	Cops6	IPI	PR:Q8VBV7	Mouse	PMID:9707402
Molecular Function	GO:0005515	protein binding	Cops6	IPI	PR:O88544	Mouse	PMID:9707402
Cellular Component	GO:0008180	COP9 signalosome	COPS6	IPI		Human	PMID:25043011
Cellular Component	GO:0008180	COP9 signalosome	COPS6	IDA		Human	PMID:18850735
Cellular Component	GO:0008180	COP9 signalosome	Cops6	IDA		Mouse	PMID:9707402
Cellular Component	GO:0005737	cytoplasm	COPS6	IDA		Human	PMID:24421388
Cellular Component	GO:0005654	nucleoplasm	COPS6	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	COPS6	IDA		Human	PMID:24421388
Biological Process	GO:0007420	brain development	cops6	IMP	ZFIN:ZDB-MRPHLNO-100226-6	Zfish	PMID:21425078
Biological Process	GO:0021551	central nervous system morphogenesis	cops6	IMP	ZFIN:ZDB-MRPHLNO-100226-6	Zfish	PMID:20040115
Biological Process	GO:0060026	convergent extension	cops6	IMP	ZFIN:ZDB-MRPHLNO-100226-6	Zfish	PMID:21425078
Biological Process	GO:1904888	cranial skeletal system development	cops6	IMP	ZFIN:ZDB-MRPHLNO-100226-6	Zfish	PMID:28450118
Biological Process	GO:0009953	dorsal/ventral pattern formation	cops6	IMP	ZFIN:ZDB-MRPHLNO-100226-6	Zfish	PMID:21425078
Biological Process	GO:0000338	protein deneddylation	COPS6	IDA		Human	PMID:19141280

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern