Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CP
  • Mouse genes Cp
  • Rat genes Cp
  • Zfish genes cp
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cp

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005507	copper ion binding	Cp	IDA		Mouse	PMID:15634671
Molecular Function	GO:0005507	copper ion binding	Cp	IDA		Mouse	PMID:16436657
Molecular Function	GO:0005507	copper ion binding	Cp	IDA		Rat	PMID:12099680|RGD:727703
Molecular Function	GO:0004322	ferroxidase activity	Cp	IDA		Mouse	PMID:16436657
Molecular Function	GO:0051087	protein-folding chaperone binding	CP	IPI	UniProtKB:P10909	Human	PMID:19996109
Cellular Component	GO:0072562	blood microparticle	CP	HDA		Human	PMID:22516433
Cellular Component	GO:0009986	cell surface	Cp	IDA		Rat	PMID:10660599|RGD:727562
Cellular Component	GO:0005737	cytoplasm	cp	IDA		Zfish	PMID:25139857
Cellular Component	GO:0070062	extracellular exosome	CP	HDA		Human	PMID:19056867
Cellular Component	GO:0070062	extracellular exosome	CP	HDA		Human	PMID:23533145
Cellular Component	GO:0005615	extracellular space	CP	HDA		Human	PMID:16502470
Cellular Component	GO:0005615	extracellular space	CP	IDA		Human	PMID:19996109
Cellular Component	GO:0005615	extracellular space	CP	HDA		Human	PMID:20551380
Cellular Component	GO:0005615	extracellular space	Cp	HDA		Mouse	MGI:MGI:5640941|PMID:24006456
Cellular Component	GO:0005615	extracellular space	Cp	IDA		Mouse	PMID:16436657
Cellular Component	GO:0005615	extracellular space	Cp	IDA		Rat	PMID:10660599|RGD:727562
Cellular Component	GO:0005765	lysosomal membrane	CP	HDA		Human	PMID:17897319
Cellular Component	GO:0005634	nucleus	cp	IDA		Zfish	PMID:25139857
Biological Process	GO:0007568	aging	Cp	IEP		Rat	PMID:16597684|RGD:1599628
Biological Process	GO:0007565	female pregnancy	Cp	IEP		Rat	PMID:28089327|RGD:25671605
Biological Process	GO:0007595	lactation	Cp	IEP		Rat	PMID:28089327|RGD:25671605
Biological Process	GO:0001889	liver development	Cp	IEP		Rat	PMID:2332446|RGD:728241
Biological Process	GO:0030324	lung development	Cp	IEP		Rat	PMID:2332446|RGD:728241
Biological Process	GO:0060056	mammary gland involution	Cp	IEP		Rat	PMID:28089327|RGD:25671605
Biological Process	GO:0046688	response to copper ion	Cp	IDA		Rat	PMID:19700037|RGD:2314683
Biological Process	GO:0007584	response to nutrient	Cp	IEP		Rat	PMID:16597684|RGD:1599628

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern