Comparative GO Graph (mouse, human, rat, zebrafish)

Source

Alliance of Genome Resources

Compare experimental GO annotations for Human-Mouse-Rat-Zebrafish orthologs to Mouse Cpeb3

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

This class contains
- Human genes CPEB3
- Mouse genes Cpeb3
- Rat genes Cpeb3
- Zfish genes cpeb3
Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cpeb3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0035925	mRNA 3'-UTR AU-rich region binding	Cpeb3	IDA		Mouse	MGI:MGI:3703111\|PMID:17024188
Molecular Function	GO:0003730	mRNA 3'-UTR binding	CPEB3	IDA		Human	PMID:22711986
Molecular Function	GO:0003730	mRNA 3'-UTR binding	Cpeb3	IDA		Mouse	MGI:MGI:5300629\|PMID:22153079
Molecular Function	GO:0003730	mRNA 3'-UTR binding	Cpeb3	IDA		Mouse	MGI:MGI:5521401\|PMID:24155305
Molecular Function	GO:0003730	mRNA 3'-UTR binding	Cpeb3	IDA		Mouse	MGI:MGI:5432966\|PMID:22711986
Molecular Function	GO:0000900	mRNA regulatory element binding translation repressor activity	Cpeb3	IDA		Mouse	MGI:MGI:5314154\|PMID:22157746
Molecular Function	GO:0005515	protein binding	CPEB3	IPI	UniProtKB:P42232	Human	PMID:20639532
Molecular Function	GO:0005515	protein binding	CPEB3	IPI	UniProtKB:P50616	Human	PMID:21336257
Molecular Function	GO:0005515	protein binding	CPEB3	IPI	UniProtKB:P97571	Human	PMID:22711986
Molecular Function	GO:0005515	protein binding	CPEB3	IPI	UniProtKB:O00410	Human	PMID:22730302
Molecular Function	GO:0005515	protein binding	CPEB3	IPI	UniProtKB:O14980	Human	PMID:22730302
Molecular Function	GO:0005515	protein binding	Cpeb3	IPI	UniProtKB:Q923S6	Mouse	MGI:MGI:5300629\|PMID:22153079
Molecular Function	GO:0005515	protein binding	Cpeb3	IPI	UniProtKB:P58252	Mouse	MGI:MGI:5314154\|PMID:22157746
Molecular Function	GO:0005515	protein binding	Cpeb3	IPI	UniProtKB:P63280	Mouse	MGI:MGI:5795795\|PMID:26074071
Molecular Function	GO:0005515	protein binding	Cpeb3	IPI	UniProtKB:Q80U58	Mouse	MGI:MGI:5520034\|PMID:22496444
Molecular Function	GO:0003723	RNA binding	CPEB3	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	CPEB3	HDA		Human	PMID:22681889
Molecular Function	GO:0003723	RNA binding	CPEB3	IDA		Human	PMID:22730302
Molecular Function	GO:0003723	RNA binding	Cpeb3	IDA		Mouse	PMID:17024188
Molecular Function	GO:0035613	RNA stem-loop binding	Cpeb3	IDA		Mouse	MGI:MGI:3703111\|PMID:17024188
Molecular Function	GO:0008135	translation factor activity, RNA binding	CPEB3	IDA		Human	PMID:22711986
Molecular Function	GO:0008135	translation factor activity, RNA binding	Cpeb3	IDA		Mouse	MGI:MGI:5521401\|PMID:24155305
Molecular Function	GO:0008135	translation factor activity, RNA binding	Cpeb3	IDA		Mouse	MGI:MGI:5300629\|PMID:22153079
Cellular Component	GO:0097440	apical dendrite	Cpeb3	IDA		Mouse	MGI:MGI:5300629\|PMID:22153079
Cellular Component	GO:0030014	CCR4-NOT complex	CPEB3	IDA		Human	PMID:21336257
Cellular Component	GO:0005737	cytoplasm	CPEB3	IDA		Human	PMID:20639532
Cellular Component	GO:0005737	cytoplasm	CPEB3	IDA		Human	PMID:22730302
Cellular Component	GO:0005737	cytoplasm	Cpeb3	IDA		Mouse	MGI:MGI:5432966\|PMID:22711986
Cellular Component	GO:0005737	cytoplasm	Cpeb3	IDA		Mouse	MGI:MGI:5520043\|PMID:20937770
Cellular Component	GO:0005737	cytoplasm	Cpeb3	IDA		Rat	PMID:22711986\|RGD:8553623
Cellular Component	GO:0005829	cytosol	CPEB3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0030425	dendrite	Cpeb3	IDA		Mouse	MGI:MGI:3703111\|PMID:17024188
Cellular Component	GO:0030425	dendrite	Cpeb3	IDA		Rat	PMID:22711986\|RGD:8553623
Cellular Component	GO:0030496	midbody	CPEB3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043005	neuron projection	CPEB3	IDA		Human	PMID:22730302
Cellular Component	GO:0043005	neuron projection	Cpeb3	IDA		Mouse	MGI:MGI:5432966\|PMID:22711986
Cellular Component	GO:0005654	nucleoplasm	CPEB3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	CPEB3	IDA		Human	PMID:20639532
Cellular Component	GO:0005634	nucleus	CPEB3	IDA		Human	PMID:22730302
Cellular Component	GO:0005634	nucleus	Cpeb3	IDA		Mouse	MGI:MGI:5520043\|PMID:20937770
Cellular Component	GO:0005634	nucleus	Cpeb3	IDA		Rat	PMID:22711986\|RGD:8553623
Cellular Component	GO:0005886	plasma membrane	CPEB3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0098794	postsynapse	Cpeb3	IDA		Rat	PMID:17024188\|RGD:13702378
Cellular Component	GO:0098794	postsynapse	Cpeb3	IMP		Rat	PMID:17024188\|RGD:13702378
Cellular Component	GO:0045202	synapse	Cpeb3	IDA		Mouse	MGI:MGI:5432966\|PMID:22711986
Cellular Component	GO:0045202	synapse	Cpeb3	IDA		Mouse	PMID:17024188
Biological Process	GO:0061158	3'-UTR-mediated mRNA destabilization	CPEB3	IDA		Human	PMID:21336257
Biological Process	GO:0071230	cellular response to amino acid stimulus	CPEB3	IDA		Human	PMID:20639532
Biological Process	GO:0071230	cellular response to amino acid stimulus	CPEB3	IDA		Human	PMID:22730302
Biological Process	GO:0071230	cellular response to amino acid stimulus	Cpeb3	IDA		Mouse	MGI:MGI:3703111\|PMID:17024188
Biological Process	GO:0071230	cellular response to amino acid stimulus	Cpeb3	IDA		Mouse	MGI:MGI:5300629\|PMID:22153079
Biological Process	GO:0071230	cellular response to amino acid stimulus	Cpeb3	IDA		Mouse	MGI:MGI:5432966\|PMID:22711986
Biological Process	GO:0071230	cellular response to amino acid stimulus	Cpeb3	IDA		Mouse	MGI:MGI:5520043\|PMID:20937770
Biological Process	GO:0007616	long-term memory	Cpeb3	IMP		Mouse	MGI:MGI:5648736\|PMID:26074003
Biological Process	GO:0007616	long-term memory	Cpeb3	IMP		Mouse	MGI:MGI:5521401\|PMID:24155305
Biological Process	GO:1900248	negative regulation of cytoplasmic translational elongation	Cpeb3	IDA		Mouse	MGI:MGI:5314154\|PMID:22157746
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	CPEB3	IDA		Human	PMID:20639532
Biological Process	GO:0017148	negative regulation of translation	CPEB3	IDA		Human	PMID:21336257
Biological Process	GO:0017148	negative regulation of translation	CPEB3	IDA		Human	PMID:22711986
Biological Process	GO:0017148	negative regulation of translation	Cpeb3	IDA		Mouse	MGI:MGI:5795795\|PMID:26074071
Biological Process	GO:0017148	negative regulation of translation	Cpeb3	IDA		Mouse	MGI:MGI:3703111\|PMID:17024188
Biological Process	GO:0017148	negative regulation of translation	Cpeb3	IMP		Mouse	PMID:17024188
Biological Process	GO:0060999	positive regulation of dendritic spine development	Cpeb3	IDA		Mouse	MGI:MGI:5300629\|PMID:22153079
Biological Process	GO:1900273	positive regulation of long-term synaptic potentiation	Cpeb3	IMP		Mouse	MGI:MGI:5648736\|PMID:26074003
Biological Process	GO:1900365	positive regulation of mRNA polyadenylation	Cpeb3	IDA		Mouse	MGI:MGI:5300629\|PMID:22153079
Biological Process	GO:1900153	positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	CPEB3	IDA		Human	PMID:21336257
Biological Process	GO:0060213	positive regulation of nuclear-transcribed mRNA poly(A) tail shortening	CPEB3	IDA		Human	PMID:21336257
Biological Process	GO:0045727	positive regulation of translation	Cpeb3	IMP		Mouse	MGI:MGI:5648736\|PMID:26074003
Biological Process	GO:0045727	positive regulation of translation	Cpeb3	IDA		Mouse	MGI:MGI:5300629\|PMID:22153079
Biological Process	GO:0045727	positive regulation of translation	Cpeb3	IDA		Mouse	MGI:MGI:5795795\|PMID:26074071
Biological Process	GO:0060998	regulation of dendritic spine development	Cpeb3	IMP		Mouse	MGI:MGI:5521401\|PMID:24155305
Biological Process	GO:0048167	regulation of synaptic plasticity	Cpeb3	IMP		Mouse	MGI:MGI:5521401\|PMID:24155305
Biological Process	GO:0050955	thermoception	Cpeb3	IMP		Mouse	MGI:MGI:5796068\|PMID:26915043
Biological Process	GO:0006412	translation	Cpeb3	IMP		Mouse	PMID:17024188

Gene Ontology Evidence Code Abbreviations:

EXP Inferred from experiment

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

HTP Inferred from High Throughput Experiment

HDA Inferred from High Throughput Direct Assay

HMP Inferred from High Throughput Mutant Phenotype

HGI Inferred from High Throughput Genetic Interaction

HEP Inferred from High Throughput Expression Pattern

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 06/12/2024 MGI 6.13

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023. Complete table of the annotations represented in this image is provided below.

Molecular Function

Cellular Component

Biological Process

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.