Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CPEB4
  • Mouse genes Cpeb4
  • Rat genes Cpeb4
  • Zfish genes cpeb4a,cpeb4b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cpeb4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CPEB4	IPI	UniProtKB:P50616	Human	PMID:21336257
Molecular Function	GO:0003723	RNA binding	CPEB4	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	CPEB4	HDA		Human	PMID:22681889
Molecular Function	GO:0003723	RNA binding	Cpeb4	IDA		Mouse	PMID:17024188
Cellular Component	GO:0005737	cytoplasm	CPEB4	IDA		Human	PMID:20639532
Cellular Component	GO:0005737	cytoplasm	Cpeb4	IDA		Mouse	MGI:MGI:5520043|PMID:20937770
Cellular Component	GO:0005737	cytoplasm	Cpeb4	IDA		Rat	PMID:20937770|RGD:8553637
Cellular Component	GO:0030425	dendrite	Cpeb4	IDA		Mouse	MGI:MGI:3703111|PMID:17024188
Cellular Component	GO:0030425	dendrite	Cpeb4	IDA		Rat	PMID:20937770|RGD:8553637
Cellular Component	GO:0005783	endoplasmic reticulum	Cpeb4	IDA		Mouse	MGI:MGI:5520043|PMID:20937770
Cellular Component	GO:0005634	nucleus	CPEB4	IDA		Human	PMID:20639532
Cellular Component	GO:0005634	nucleus	Cpeb4	IDA		Mouse	MGI:MGI:5520043|PMID:20937770
Cellular Component	GO:0005634	nucleus	Cpeb4	IDA		Rat	PMID:20937770|RGD:8553637
Cellular Component	GO:0098794	postsynapse	Cpeb4	IDA		Rat	PMID:17024188|RGD:13702378
Cellular Component	GO:0098794	postsynapse	Cpeb4	IMP		Rat	PMID:17024188|RGD:13702378
Cellular Component	GO:0014069	postsynaptic density	Cpeb4	IDA		Mouse	MGI:MGI:3703111|PMID:17024188
Cellular Component	GO:0045202	synapse	Cpeb4	IDA		Mouse	PMID:17024188
Biological Process	GO:0071230	cellular response to amino acid stimulus	Cpeb4	IDA		Mouse	MGI:MGI:5520043|PMID:20937770
Biological Process	GO:0071230	cellular response to amino acid stimulus	Cpeb4	IDA		Rat	PMID:20937770|RGD:8553637
Biological Process	GO:0036294	cellular response to decreased oxygen levels	Cpeb4	IDA		Rat	PMID:20937770|RGD:8553637
Biological Process	GO:0042149	cellular response to glucose starvation	Cpeb4	IDA		Rat	PMID:20937770|RGD:8553637
Biological Process	GO:0035235	ionotropic glutamate receptor signaling pathway	Cpeb4	IDA		Rat	PMID:20937770|RGD:8553637
Biological Process	GO:0043524	negative regulation of neuron apoptotic process	Cpeb4	IMP		Rat	PMID:20937770|RGD:8553637
Biological Process	GO:0002931	response to ischemia	Cpeb4	IDA		Mouse	MGI:MGI:5520043|PMID:20937770

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern